myRT

myRT report for GCA_002570855.1_ASM257085v1

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Seq: NVDM01000275.1 Bacillus thuringiensis strain AFS061177 AFS061177_99_G4_Contig275_140514, whole genome shotgun sequence (11661 bp)
Overview 1 RT 1: 378-3291 bp Neighborhood of RT #1 [378, 3305] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 378-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663-1 302 bp Feature: domain Description: GIIM Note: maturase Location: 1377-1602 bp Feature: domain Description: GIIM Note: maturase Location: 1 377-1 602 bp Feature: gene Location: 1856-2035 bp Feature: gene Location: 2187-3305 bp Feature: domain Description: DDE_Tnp_1 Location: 2604-3291 bp Feature: domain Description: DDE_Tnp_1 Location: 2604-3291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: NVDM01000047.1 Bacillus thuringiensis strain AFS061177 AFS061177_99_G4_Contig47_140514, whole genome shotgun sequence (53821 bp)
Overview 1 RT 1: 24681-30733 bp Neighborhood of RT #1 [24681, 30753] PRK00148 PRK00024 RVT-GII HNHc PRK13927 PRK13922 Feature: gene Location: 24681-25256 bp Feature: domain Description: PRK00148 Location: 24690-25251 bp Feature: domain Description: PRK00148 Location: 2 4690-2 52 51 bp Feature: gene Location: 25303-25944 bp Feature: domain Description: PRK00024 Location: 25315-25930 bp Feature: domain Description: PRK0002 4 Location: 2 5315-2 5930 bp Feature: gene Location: 26645-28519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26966-27677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6966-2 7677 bp Feature: domain Description: HNHc Note: nucleases Location: 28271-28439 bp Feature: domain Description: HNHc Note: nucleases Location: 2 82 71-2 8439 bp Feature: gene Location: 28841-29860 bp Feature: domain Description: PRK13927 Location: 28859-29849 bp Feature: domain Description: PRK1392 7 Location: 2 8859-2 9849 bp Feature: gene Location: 29902-30753 bp Feature: domain Description: PRK13922 Location: 29905-30733 bp Feature: domain Description: PRK1392 2 Location: 2 9905-30733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), PRK00024 (DNA repair protein RadC), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)