myRT

myRT report for GCA_002571185.1_ASM257118v1

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Seq: NVDQ01000020.1 Bacillus cereus strain AFS060282 AFS060282_106_C3_Contig20_140523, whole genome shotgun sequence (32693 bp)
Overview 1 RT 1: 4509-15515 bp Neighborhood of RT #1 [4509, 15515] RVT-GII RVT-GII Intron_maturas2 RVT-GII Ftsk_gamma DUF772 DDE_Tnp_1 DDE_Tnp_1_6 RVT-GII RVT-GII HNHc Feature: gene Location: 4509-4733 bp Feature: gene Location: 4769-5689 bp Feature: gene Location: 6420-7052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6690-7050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6690-7050 bp Feature: gene Location: 7110-8012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7209-7434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7209-7434 bp Feature: domain Description: Intron_maturas2 Location: 7518-7809 bp Feature: domain Description: Intron_maturas2 Location: 751 8-7809 bp Feature: gene Location: 8158-8361 bp Feature: gene Location: 9034-9504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9334-9502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9334-9502 bp Feature: gene Location: 9837-10211 bp Feature: domain Description: Ftsk_gamma Location: 10008-10188 bp Feature: domain Description: Ftsk_gamma Location: 1 0008-1 01 88 bp Feature: gene Location: 10479-10775 bp Feature: gene Location: 10851-11573 bp Feature: domain Description: DUF772 Location: 10947-11139 bp Feature: domain Description: DUF772 Location: 1 0947-1 1 1 39 bp Feature: domain Description: DDE_Tnp_1 Location: 11193-11493 bp Feature: domain Description: DDE_Tnp_1 Location: 1 1 1 93-1 1 493 bp Feature: gene Location: 11577-11720 bp Feature: domain Description: DDE_Tnp_1_6 Location: 11583-11709 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 1 583-1 1 709 bp Feature: gene Location: 13156-13635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13477-13591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3477-1 3591 bp Feature: gene Location: 13653-13967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13662-13944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3662-1 3944 bp Feature: gene Location: 14125-14889 bp Feature: domain Description: HNHc Note: nucleases Location: 14611-14773 bp Feature: domain Description: HNHc Note: nucleases Location: 1 461 1 -1 4773 bp Feature: gene Location: 15171-15515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Ftsk_gamma (smart00843), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), DDE_Tnp_1_6 (pfam13751), HNHc (smart00507)

Seq: NVDQ01000003.1 Bacillus cereus strain AFS060282 AFS060282_106_C3_Contig3_140523, whole genome shotgun sequence (38422 bp)
Overview 1 RT 1: 15549-24406 bp Neighborhood of RT #1 [15549, 24406] TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 15549-16520 bp Feature: domain Description: TraC-F-type Location: 15969-16443 bp Feature: domain Description: TraC-F-type Location: 15969-16443 bp Feature: gene Location: 16821-16955 bp Feature: gene Location: 17249-19081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17549-18254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17549-182 54 bp Feature: domain Description: HNHc Note: nucleases Location: 18833-18965 bp Feature: domain Description: HNHc Note: nucleases Location: 18833-18965 bp Feature: gene Location: 19373-20341 bp Feature: domain Description: TraC-F-type Location: 19400-20180 bp Feature: domain Description: TraC-F-type Location: 19400-2 0180 bp Feature: gene Location: 20372-24406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)

Seq: NVDQ01000053.1 Bacillus cereus strain AFS060282 AFS060282_106_C3_Contig53_140523, whole genome shotgun sequence (5122 bp)
Overview 1 RT 1: 1296-4946 bp Neighborhood of RT #1 [1296, 5119] Rve FieF RVT-GII Feature: gene Location: 1296-1427 bp Feature: domain Description: Rve Location: 1302-1419 bp Feature: domain Description: Rve Location: 13 02-1419 bp Feature: gene Location: 2002-2871 bp Feature: domain Description: FieF Location: 2011-2857 bp Feature: domain Description: FieF Location: 2011-2857 bp Feature: gene Location: 3956-5119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4253-4946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4253 -4946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), FieF (COG0053), RVT-GII

Seq: NVDQ01000063.1 Bacillus cereus strain AFS060282 AFS060282_106_C3_Contig63_140523, whole genome shotgun sequence (1721 bp)
Overview 1 RT 1: 3-1633 bp Neighborhood of RT #1 [3, 1633] RVT-GII GIIM Feature: gene Location: 3-1304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-951 bp Feature: domain Description: GIIM Note: maturase Location: 1026-1257 bp Feature: domain Description: GIIM Note: maturase Location: 1026-1257 bp Feature: gene Location: 1454-1633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NVDQ01000090.1 Bacillus cereus strain AFS060282 AFS060282_106_C3_Contig90_140523, whole genome shotgun sequence (4868 bp)
Overview 1 RT 1: 3323-4692 bp Neighborhood of RT #1 [3323, 4865] RVT-GII Feature: gene Location: 3323-3472 bp Feature: gene Location: 3702-4865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3999-4692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3999-4692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII