myRT

myRT report for GCA_002571545.1_ASM257154v1

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Seq: NVIG01000068.1 Bacillus pseudomycoides strain AFS069374 AFS069374_104_F3_Contig68_140523, whole genome shotgun sequence (76209 bp)
Overview 1 RT 1: 517-6370 bp Neighborhood of RT #1 [517, 6579] MFS_MefA_like RVT-GII GIIM DUF4352 DUF5105 DUF3994 Feature: gene Location: 517-1776 bp Feature: domain Description: MFS_MefA_like Location: 565-1705 bp Feature: domain Description: MFS_MefA_like Location: 565-1 705 bp Feature: gene Location: 2463-2654 bp Feature: gene Location: 2948-3658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3152-3311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 52-331 1 bp Feature: domain Description: GIIM Note: maturase Location: 3563-3656 bp Feature: domain Description: GIIM Note: maturase Location: 3563-3656 bp Feature: gene Location: 4329-5384 bp Feature: domain Description: DUF4352 Location: 4443-4764 bp Feature: domain Description: DUF4352 Location: 4443-4764 bp Feature: domain Description: DUF5105 Location: 4830-5379 bp Feature: domain Description: DUF51 05 Location: 4830-5379 bp Feature: gene Location: 5617-6579 bp Feature: domain Description: DUF3994 Location: 6061-6370 bp Feature: domain Description: DUF3994 Location: 6061 -6370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4352 (pfam11611), DUF5105 (pfam17118), MFS_MefA_like (cd06173)

Seq: NVIG01000070.1 Bacillus pseudomycoides strain AFS069374 AFS069374_104_F3_Contig70_140523, whole genome shotgun sequence (16272 bp)
Overview 1 RT 1: 10044-14391 bp Neighborhood of RT #1 [10044, 14462] T4SS-DNA_transf PolY_Pol_V_umuC RVT-GII Intron_maturas2 HNHc PRK03103 Rve Feature: gene Location: 10044-10355 bp Feature: domain Description: T4SS-DNA_transf Location: 10071-10248 bp Feature: domain Description: T4SS-DNA_transf Location: 10071-102 48 bp Feature: gene Location: 10367-10621 bp Feature: domain Description: PolY_Pol_V_umuC Location: 10370-10616 bp Feature: domain Description: PolY_Pol_V_umuC Location: 10370-10616 bp Feature: gene Location: 11288-13099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11552-12383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11552 -12 383 bp Feature: domain Description: Intron_maturas2 Location: 12464-12797 bp Feature: domain Description: Intron_maturas2 Location: 12 464-12 797 bp Feature: domain Description: HNHc Note: nucleases Location: 12893-13070 bp Feature: domain Description: HNHc Note: nucleases Location: 12 893-13070 bp Feature: gene Location: 13362-13622 bp Feature: domain Description: PRK03103 Location: 13377-13611 bp Feature: domain Description: PRK03103 Location: 13377-13611 bp Feature: gene Location: 13755-14462 bp Feature: domain Description: Rve Location: 13779-14391 bp Feature: domain Description: Rve Location: 13779-14391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), PolY_Pol_V_umuC (cd01700), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK03103 (DNA polymerase IV; Reviewed), Rve (COG3316)