myRT

myRT report for GCA_002572135.1_ASM257213v1

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Seq: NVJS01000150.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig150_140514, whole genome shotgun sequence (7373 bp)
Overview 1 RT 1: 3607-7084 bp Neighborhood of RT #1 [3607, 7215] RVT-GII HNHc Feature: gene Location: 3607-4698 bp Feature: gene Location: 5027-5245 bp Feature: gene Location: 5419-7215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5713-6409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 3-6409 bp Feature: domain Description: HNHc Note: nucleases Location: 7009-7084 bp Feature: domain Description: HNHc Note: nucleases Location: 7009-7084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NVJS01000325.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig176_140514, whole genome shotgun sequence (2567 bp)
Overview 1 RT 1: 132-1926 bp Neighborhood of RT #1 [132, 1955] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 132-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402 -12 30 bp Feature: domain Description: Intron_maturas2 Location: 1302-1620 bp Feature: domain Description: Intron_maturas2 Location: 1302 -162 0 bp Feature: domain Description: HNHc Note: nucleases Location: 1773-1926 bp Feature: domain Description: HNHc Note: nucleases Location: 1773-192 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NVJS01000362.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig213_140514, whole genome shotgun sequence (13857 bp)
Overview 1 RT 1: 3-9050 bp Neighborhood of RT #1 [3, 9091] AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Feature: gene Location: 3-521 bp Feature: gene Location: 531-956 bp Feature: gene Location: 1395-7034 bp Feature: domain Description: AE_Prim_S_like Location: 1605-1824 bp Feature: domain Description: AE_Prim_S_like Location: 1605-1824 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2811-3465 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2811-3 465 bp Feature: gene Location: 7310-7537 bp Feature: domain Description: PRK13922 Location: 7397-7517 bp Feature: domain Description: PRK13 922 Location: 73 97-7517 bp Feature: gene Location: 8000-9091 bp Feature: domain Description: RapH_N Location: 8021-8192 bp Feature: domain Description: RapH_N Location: 8021-8192 bp Feature: domain Description: TPR Location: 8327-8594 bp Feature: domain Description: TPR Location: 83 27-8594 bp Feature: domain Description: TPR Location: 8639-9050 bp Feature: domain Description: TPR Location: 863 9-9050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028)

Seq: NVJS01000386.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig237_140514, whole genome shotgun sequence (2660 bp)
Overview 1 RT 1: 235-1982 bp Neighborhood of RT #1 [235, 1996] RVT-GII GIIM HNHc RVT-GII Feature: gene Location: 235-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-508 bp Feature: domain Description: GIIM Note: maturase Location: 622-790 bp Feature: domain Description: GIIM Note: maturase Location: 622-790 bp Feature: domain Description: HNHc Note: nucleases Location: 1138-1303 bp Feature: domain Description: HNHc Note: nucleases Location: 1138-1303 bp Feature: gene Location: 1388-1996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1688-1982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1688-1982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NVJS01000003.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig3_140514, whole genome shotgun sequence (1890 bp)
Overview 1 RT 1: 167-1744 bp Neighborhood of RT #1 [167, 1827] RVT-GII GIIM Feature: gene Location: 167-346 bp Feature: gene Location: 496-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805 -1444 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Feature: domain Description: GIIM Note: maturase Location: 15 19-1744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NVJS01000043.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig43_140514, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 117-1917 bp Neighborhood of RT #1 [117, 1940] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 117-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 381-1215 bp Feature: domain Description: Intron_maturas2 Location: 1284-1623 bp Feature: domain Description: Intron_maturas2 Location: 1284-16 23 bp Feature: domain Description: HNHc Note: nucleases Location: 1761-1917 bp Feature: domain Description: HNHc Note: nucleases Location: 176 1-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NVJS01000044.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig44_140514, whole genome shotgun sequence (2610 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-17 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NVJS01000051.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig51_140514, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 94-2420 bp Neighborhood of RT #1 [94, 2420] RVT-GII HNHc Feature: gene Location: 94-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618 -1753 bp Feature: gene Location: 2202-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NVJS01000069.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig69_140514, whole genome shotgun sequence (55717 bp)
Overview 1 RT 1: 24109-31338 bp Neighborhood of RT #1 [24109, 31338] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 24109-24822 bp Feature: gene Location: 24839-27241 bp Feature: domain Description: KOG1000 Location: 25547-25763 bp Feature: domain Description: KOG1000 Location: 25547-25763 bp Feature: domain Description: KOG1000 Location: 26366-26699 bp Feature: domain Description: KOG1000 Location: 26366-2669 9 bp Feature: gene Location: 27519-29384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27819-28524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27819 -28524 bp Feature: domain Description: GIIM Note: maturase Location: 28611-28794 bp Feature: domain Description: GIIM Note: maturase Location: 28611-2879 4 bp Feature: gene Location: 30131-31039 bp Feature: gene Location: 31111-31338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, GIIM (pfam08388)

Seq: NVJS01000073.1 Bacillus thuringiensis strain AFS061780 AFS061780_101_F11_Contig73_140514, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 712-2377 bp Neighborhood of RT #1 [712, 2502] RVT-GII HNHc Feature: gene Location: 712-2502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1009-1705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10 09-1705 bp Feature: domain Description: HNHc Note: nucleases Location: 2245-2377 bp Feature: domain Description: HNHc Note: nucleases Location: 2245-2377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)