myRT

myRT report for GCA_002573055.1_ASM257305v1

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Seq: MOXV01000130.1 Escherichia coli strain 3_Esco_CA-NL L0135a_contig_130, whole genome shotgun sequence (45786 bp)
Overview 1 RT 1: 15023-19606 bp Neighborhood of RT #1 [15023, 19869] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 15023-15196 bp Feature: gene Location: 15230-15538 bp Feature: gene Location: 15525-16688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15639-16326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5639-1 6326 bp Feature: gene Location: 17014-17577 bp Feature: domain Description: Inovirus_Gp2 Location: 17071-17512 bp Feature: domain Description: Inovirus_Gp2 Location: 1 7071 -1 751 2 bp Feature: gene Location: 18436-19869 bp Feature: domain Description: DUF3987 Location: 18529-19606 bp Feature: domain Description: DUF3987 Location: 1 8529-1 9606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)

Seq: MOXV01000155.1 Escherichia coli strain 3_Esco_CA-NL L0135a_contig_155, whole genome shotgun sequence (7735 bp)
Overview 1 RT 1: 4199-7611 bp Neighborhood of RT #1 [4199, 7619] InsE PHA02517 RVT-GII GIIM Tra5 Feature: gene Location: 4199-4498 bp Feature: domain Description: InsE Location: 4229-4493 bp Feature: domain Description: InsE Location: 42 2 9-4493 bp Feature: gene Location: 4495-4962 bp Feature: domain Description: PHA02517 Location: 4561-4900 bp Feature: domain Description: PHA02 517 Location: 4561-4900 bp Feature: gene Location: 5554-6795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5827-6559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 582 7-6559 bp Feature: domain Description: GIIM Note: maturase Location: 6634-6790 bp Feature: domain Description: GIIM Note: maturase Location: 6634-6790 bp Feature: gene Location: 6847-7077 bp Feature: gene Location: 7188-7619 bp Feature: domain Description: Tra5 Location: 7194-7611 bp Feature: domain Description: Tra5 Location: 7194-7611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: MOXV01000069.1 Escherichia coli strain 3_Esco_CA-NL L0135a_contig_69, whole genome shotgun sequence (17862 bp)
Overview 1 RT 1: 6580-12611 bp Neighborhood of RT #1 [6580, 12611] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 6580-7500 bp Feature: domain Description: AbiEii Location: 6622-7363 bp Feature: domain Description: AbiEii Location: 6622-73 63 bp Feature: gene Location: 7487-8290 bp Feature: domain Description: AbiEi_3_N Location: 7520-7781 bp Feature: domain Description: AbiEi_3 _N Location: 7520-7781 bp Feature: domain Description: AbiEi_3 Location: 7793-8249 bp Feature: domain Description: AbiEi_3 Location: 7793 -8249 bp Feature: gene Location: 8585-11794 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 9113-9602 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 9113 -9602 bp Feature: domain Description: nitrilase Location: 11108-11705 bp Feature: domain Description: nitrilase Location: 11108-11705 bp Feature: gene Location: 11955-12095 bp Feature: domain Description: Phage_ASH Location: 11982-12075 bp Feature: domain Description: Phage_ASH Location: 11982-12075 bp Feature: gene Location: 12141-12611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)