myRT

myRT report for GCA_002573115.1_ASM257311v1

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Seq: MOXX01000144.1 Escherichia coli strain 5_Esco_CA-NL L0367a_contig_144, whole genome shotgun sequence (2058 bp)
Overview 1 RT 1: 1-1869 bp Neighborhood of RT #1 [1, 2057] RVT-GII GIIM Feature: gene Location: 1-297 bp Feature: gene Location: 591-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 864-1 596 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1869 bp Feature: domain Description: GIIM Note: maturase Location: 1 671 -1 869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MOXX01000036.1 Escherichia coli strain 5_Esco_CA-NL L0367a_contig_36, whole genome shotgun sequence (17978 bp)
Overview 1 RT 1: 4402-7388 bp Neighborhood of RT #1 [4402, 7388] RVT-GII GIIM RVT-GII Feature: gene Location: 4402-4587 bp Feature: gene Location: 4760-4930 bp Feature: gene Location: 5093-5746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5096-5504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5096-5504 bp Feature: domain Description: GIIM Note: maturase Location: 5552-5744 bp Feature: domain Description: GIIM Note: maturase Location: 5552 -5744 bp Feature: gene Location: 5719-6153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5911-6127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5911-612 7 bp Feature: gene Location: 6322-6519 bp Feature: gene Location: 7062-7388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MOXX01000052.1 Escherichia coli strain 5_Esco_CA-NL L0367a_contig_52, whole genome shotgun sequence (60206 bp)
Overview 1 RT 1: 1-4633 bp Neighborhood of RT #1 [1, 4635] Caudo_TAP RVT-Retrons TIR_2 PRK10597 prfC Feature: gene Location: 1-162 bp Feature: domain Description: Caudo_TAP Location: 19-151 bp Feature: domain Description: Caudo_TAP Location: 19-151 bp Feature: gene Location: 607-2211 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 898-1489 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 898-1489 bp Feature: domain Description: TIR_2 Location: 1816-2149 bp Feature: domain Description: TIR_2 Location: 1816-2149 bp Feature: gene Location: 2569-2829 bp Feature: domain Description: PRK10597 Location: 2572-2812 bp Feature: domain Description: PRK10597 Location: 2572-2812 bp Feature: gene Location: 3049-4635 bp Feature: domain Description: prfC Location: 3067-4633 bp Feature: domain Description: prfC Location: 3 067-463 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), prfC (TIGR00503), RVT-Retrons, TIR_2 (pfam13676)