myRT

myRT report for GCA_002573175.1_ASM257317v1

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Seq: MPHX01000017.1 Escherichia coli strain 9_Esco_CA-NL Z0241a_contig_17, whole genome shotgun sequence (94140 bp)
Overview 1 RT 1: 819-4289 bp Neighborhood of RT #1 [819, 4396] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 819-1121 bp Feature: domain Description: Arm-DNA-bind_3 Location: 828-1080 bp Feature: domain Description: Arm-DNA-bind_3 Location: 828-1 080 bp Feature: gene Location: 1305-1550 bp Feature: gene Location: 1576-2508 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1678-2272 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 678-2272 bp Feature: gene Location: 2510-3496 bp Feature: gene Location: 4124-4396 bp Feature: domain Description: PRK09678 Location: 4133-4289 bp Feature: domain Description: PRK09678 Location: 41 33-4289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), Arm-DNA-bind_3 (pfam13356)

Seq: MPHX01000055.1 Escherichia coli strain 9_Esco_CA-NL Z0241a_contig_55, whole genome shotgun sequence (2367 bp)
Overview 1 RT 1: 188-2364 bp Neighborhood of RT #1 [188, 2364] RVT-GII GIIM Feature: gene Location: 188-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1193 bp Feature: domain Description: GIIM Note: maturase Location: 1268-1466 bp Feature: domain Description: GIIM Note: maturase Location: 12 68-1466 bp Feature: gene Location: 2005-2364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)