myRT

myRT report for GCA_002573205.1_ASM257320v1

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Seq: MPHZ01000023.1 Escherichia coli strain 11_Esco_CA-NL Z0531c_contig_23, whole genome shotgun sequence (169114 bp)
Overview 1 RT 1: 25342-31585 bp Neighborhood of RT #1 [25342, 31722] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 25342-25608 bp Feature: domain Description: Phage_integrase Location: 25408-25504 bp Feature: domain Description: Phage_integrase Location: 25408-25504 bp Feature: gene Location: 25691-26161 bp Feature: gene Location: 26508-29717 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27036-27525 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 27036-27525 bp Feature: domain Description: nitrilase Location: 29046-29628 bp Feature: domain Description: nitrilase Location: 29046-29628 bp Feature: gene Location: 30012-30815 bp Feature: domain Description: AbiEi_3_N Location: 30045-30306 bp Feature: domain Description: AbiEi_3_N Location: 30045-30306 bp Feature: domain Description: AbiEi_3 Location: 30318-30774 bp Feature: domain Description: AbiEi_3 Location: 3031 8-30774 bp Feature: gene Location: 30802-31722 bp Feature: domain Description: AbiEii Location: 30844-31585 bp Feature: domain Description: AbiEii Location: 30844-31 585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: MPHZ01000063.1 Escherichia coli strain 11_Esco_CA-NL Z0531c_contig_63, whole genome shotgun sequence (2336 bp)
Overview 1 RT 1: 56-1999 bp Neighborhood of RT #1 [56, 2244] RVT-GII GIIM Feature: gene Location: 56-427 bp Feature: gene Location: 721-2244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-1726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 994-172 6 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1999 bp Feature: domain Description: GIIM Note: maturase Location: 1801-1999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)