myRT

myRT report for GCA_002573685.1_ASM257368v1

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Seq: PDHN01000501.1 Candidatus Nephrothrix sp. EaCA 1164, whole genome shotgun sequence (2850 bp)
Overview 1 RT 1: 497-2403 bp Neighborhood of RT #1 [497, 2403] RVT-GII Feature: gene Location: 497-766 bp Feature: gene Location: 810-2390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2016-2298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 6-2298 bp Feature: gene Location: 2269-2403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PDHN01000512.1 Candidatus Nephrothrix sp. EaCA 1194, whole genome shotgun sequence (2044 bp)
Overview 1 RT 1: 396-1818 bp Neighborhood of RT #1 [396, 2042] RVT-GII Feature: gene Location: 396-683 bp Feature: gene Location: 912-2042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1536-1818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1536-1818 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PDHN01000516.1 Candidatus Nephrothrix sp. EaCA 1207, whole genome shotgun sequence (1292 bp)
Overview 1 RT 1: 348-1202 bp Neighborhood of RT #1 [348, 1291] RVT-CRISPR-like Feature: gene Location: 348-476 bp Feature: gene Location: 584-1291 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 629-1202 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 629-1202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDHN01000073.1 Candidatus Nephrothrix sp. EaCA 136, whole genome shotgun sequence (4469 bp)
Overview 1 RT 1: 162-4388 bp Neighborhood of RT #1 [162, 4435] RVT-UNC GIY-YIG_PLEs Feature: gene Location: 162-2123 bp Feature: gene Location: 2306-4435 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3008-3464 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3008-34 64 bp Feature: domain Description: GIY-YIG_PLEs Location: 4118-4388 bp Feature: domain Description: GIY-YIG_PLEs Location: 4 118-4 388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-UG26/RVT-CRISPR/RVT-UG5(RVT-UNC), GIY-YIG_PLEs (cd10442)

Seq: PDHN01000575.1 Candidatus Nephrothrix sp. EaCA 1390, whole genome shotgun sequence (3877 bp)
Overview 1 RT 1: 410-3025 bp Neighborhood of RT #1 [410, 3744] Exo_endo_phos_2 RVT-UNC Feature: gene Location: 410-544 bp Feature: gene Location: 669-998 bp Feature: gene Location: 1018-3744 bp Feature: domain Description: Exo_endo_phos_2 Location: 1204-1522 bp Feature: domain Description: Exo_endo_phos_2 Location: 1204-15 22 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2389-3025 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2389-3025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Exo_endo_phos_2 (pfam14529), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PDHN01000745.1 Candidatus Nephrothrix sp. EaCA 2027, whole genome shotgun sequence (3763 bp)
Overview 1 RT 1: 557-2910 bp Neighborhood of RT #1 [557, 2996] RT_nLTR_like RVT-CRISPR-like Exo_endo_phos_2 Feature: gene Location: 557-2008 bp Feature: domain Description: RT_nLTR_like Location: 632-872 bp Feature: domain Description: RT_nLTR_like Location: 6 32-872 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1019-1295 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1019-1295 bp Feature: gene Location: 2101-2466 bp Feature: gene Location: 2529-2996 bp Feature: domain Description: Exo_endo_phos_2 Location: 2592-2910 bp Feature: domain Description: Exo_endo_phos_2 Location: 2592-2910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-CRISPR, Exo_endo_phos_2 (pfam14529)

Seq: PDHN01000105.1 Candidatus Nephrothrix sp. EaCA 212, whole genome shotgun sequence (2949 bp)
Overview 1 RT 1: 3-2948 bp Neighborhood of RT #1 [3, 2948] RVT-CRISPR-like Feature: gene Location: 3-692 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 54-333 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 54-333 bp Feature: gene Location: 2156-2692 bp Feature: gene Location: 2721-2948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDHN01000822.1 Candidatus Nephrothrix sp. EaCA 2412, whole genome shotgun sequence (2165 bp)
Overview 1 RT 1: 81-1904 bp Neighborhood of RT #1 [81, 1904] RVT-CRISPR-like Feature: gene Location: 81-1259 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 192-393 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 192-393 bp Feature: gene Location: 1674-1904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDHN01000883.1 Candidatus Nephrothrix sp. EaCA 2705, whole genome shotgun sequence (3122 bp)
Overview 1 RT 1: 185-2927 bp Neighborhood of RT #1 [185, 2941] RVT-GII zf-RVT RT_nLTR_like Feature: gene Location: 185-1828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 4-464 bp Feature: domain Description: zf-RVT Location: 1163-1358 bp Feature: domain Description: zf-RVT Location: 1163-1358 bp Feature: gene Location: 1867-2118 bp Feature: gene Location: 2222-2941 bp Feature: domain Description: RT_nLTR_like Location: 2756-2927 bp Feature: domain Description: RT_nLTR_like Location: 2756-29 27 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, zf-RVT (pfam13966), RT_nLTR_like (cd01650)

Seq: PDHN01000886.1 Candidatus Nephrothrix sp. EaCA 2725, whole genome shotgun sequence (1323 bp)
Overview 1 RT 1: 1-568 bp Neighborhood of RT #1 [1, 1077] RVT-GII RVT-GII Feature: gene Location: 1-1077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79-244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424-568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PDHN01000949.1 Candidatus Nephrothrix sp. EaCA 3109, whole genome shotgun sequence (3062 bp)
Overview 1 RT 1: 358-2785 bp Neighborhood of RT #1 [358, 3060] L1-EN RVT-CRISPR-like Feature: gene Location: 358-3060 bp Feature: domain Description: L1-EN Location: 538-1261 bp Feature: domain Description: L1-EN Location: 538-1261 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2143-2785 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2143-2785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-CRISPR

Seq: PDHN01001002.1 Candidatus Nephrothrix sp. EaCA 3619, whole genome shotgun sequence (4507 bp)
Overview 1 RT 1: 904-2816 bp Neighborhood of RT #1 [904, 3535] RVT-UNC Feature: gene Location: 904-1110 bp Feature: gene Location: 1184-3535 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2180-2816 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2180-2816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PDHN01000023.1 Candidatus Nephrothrix sp. EaCA 37, whole genome shotgun sequence (1656 bp)
Overview 1 RT 1: 31-610 bp Neighborhood of RT #1 [31, 1239] RVT-UNC RT_nLTR_like Feature: gene Location: 31-1239 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 145-355 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 145-355 bp Feature: domain Description: RT_nLTR_like Location: 406-610 bp Feature: domain Description: RT_nLTR_like Location: 406-610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR/RVT-UG19/RVT-GII(RVT-UNC), RT_nLTR_like (cd01650)

Seq: PDHN01001019.1 Candidatus Nephrothrix sp. EaCA 3795, whole genome shotgun sequence (3342 bp)
Overview 1 RT 1: 580-2701 bp Neighborhood of RT #1 [580, 3339] L1-EN RVT-UNC Feature: gene Location: 580-3339 bp Feature: domain Description: L1-EN Location: 586-1240 bp Feature: domain Description: L1-EN Location: 586-1240 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2107-2701 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2107-2701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: PDHN01001062.1 Candidatus Nephrothrix sp. EaCA 4347, whole genome shotgun sequence (2366 bp)
Overview 1 RT 1: 150-2045 bp Neighborhood of RT #1 [150, 2045] RVT-UG19 Feature: gene Location: 150-869 bp Feature: gene Location: 791-1660 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 893-1019 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 893-1019 bp Feature: gene Location: 1875-2045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19

Seq: PDHN01001114.1 Candidatus Nephrothrix sp. EaCA 5396, whole genome shotgun sequence (2552 bp)
Overview 1 RT 1: 398-1362 bp Neighborhood of RT #1 [398, 2549] RVT-CRISPR-like Feature: gene Location: 398-577 bp Feature: gene Location: 849-2549 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 939-1362 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 939-1362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDHN01001145.1 Candidatus Nephrothrix sp. EaCA 6720, whole genome shotgun sequence (1708 bp)
Overview 1 RT 1: 2-1254 bp Neighborhood of RT #1 [2, 1706] RVT-UNC Feature: gene Location: 2-226 bp Feature: gene Location: 411-1706 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 609-1254 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 609-1254 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: PDHN01000302.1 Candidatus Nephrothrix sp. EaCA 681, whole genome shotgun sequence (1081 bp)
Overview 1 RT 1: 2-532 bp Neighborhood of RT #1 [2, 1080] RVT-CRISPR-like RVT-CRISPR-like Feature: gene Location: 2-262 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5-248 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5-248 bp Feature: gene Location: 235-1080 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 265-532 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 265-532 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDHN01000334.1 Candidatus Nephrothrix sp. EaCA 752, whole genome shotgun sequence (2755 bp)
Overview 1 RT 1: 255-2059 bp Neighborhood of RT #1 [255, 2589] RVT-CRISPR-like Feature: gene Location: 255-506 bp Feature: gene Location: 829-2589 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1420-2059 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 1420-2059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: PDHN01001159.1 Candidatus Nephrothrix sp. EaCA 7648, whole genome shotgun sequence (1099 bp)
Overview 1 RT 1: 2-632 bp Neighborhood of RT #1 [2, 1096] RVT-GII Feature: gene Location: 2-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23-632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23-632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PDHN01001169.1 Candidatus Nephrothrix sp. EaCA 8660, whole genome shotgun sequence (2935 bp)
Overview 1 RT 1: 1-1896 bp Neighborhood of RT #1 [1, 1896] RT_nLTR_like RVT-CRISPR-like Feature: gene Location: 1-756 bp Feature: domain Description: RT_nLTR_like Location: 208-322 bp Feature: domain Description: RT_nLTR_like Location: 208-322 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 415-742 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 415-742 bp Feature: gene Location: 1133-1435 bp Feature: gene Location: 1468-1896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RT_nLTR_like (cd01650), RVT-CRISPR

Seq: PDHN01000394.1 Candidatus Nephrothrix sp. EaCA 883, whole genome shotgun sequence (2212 bp)
Overview 1 RT 1: 1-1892 bp Neighborhood of RT #1 [1, 1892] RVT-CRISPR-like Feature: gene Location: 1-447 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 16-430 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 16-430 bp Feature: gene Location: 1190-1462 bp Feature: gene Location: 1599-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR