myRT

myRT report for GCA_002574505.1_ASM257450v1

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Seq: NUGP01000117.1 Bacillus thuringiensis strain AFS055470 AFS055470_102_D7_Contig117_140514, whole genome shotgun sequence (34718 bp)
Overview 1 RT 1: 29162-34622 bp Neighborhood of RT #1 [29162, 34717] Lysozyme_like Spr RVT-GII HNHc RVT-GII CwlT_like TraC-F-type TraC-F-type Feature: gene Location: 29162-29434 bp Feature: gene Location: 29464-30138 bp Feature: domain Description: Lysozyme_like Location: 29500-29692 bp Feature: domain Description: Lysozyme_like Location: 29500-29692 bp Feature: domain Description: Spr Location: 29740-30115 bp Feature: domain Description: Spr Location: 29740-301 1 5 bp Feature: gene Location: 30214-31416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30217-30598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3021 7-30598 bp Feature: domain Description: HNHc Note: nucleases Location: 31162-31294 bp Feature: domain Description: HNHc Note: nucleases Location: 31 1 62-31 294 bp Feature: gene Location: 31410-31982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31656-31959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 656-31 959 bp Feature: gene Location: 32767-33270 bp Feature: domain Description: CwlT_like Location: 32971-33253 bp Feature: domain Description: CwlT_like Location: 32971 -33253 bp Feature: gene Location: 33275-34717 bp Feature: domain Description: TraC-F-type Location: 33497-33731 bp Feature: domain Description: TraC-F-type Location: 33497-33731 bp Feature: domain Description: TraC-F-type Location: 34295-34622 bp Feature: domain Description: TraC-F-type Location: 34295-34622 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), RVT-GII, HNHc (smart00507), CwlT_like, TraC-F-type (TIGR02746)

Seq: NUGP01000012.1 Bacillus thuringiensis strain AFS055470 AFS055470_102_D7_Contig12_140514, whole genome shotgun sequence (79307 bp)
Overview 1 RT 1: 34569-37573 bp 2 RT 2: 44942-50980 bp Neighborhood of RT #1 [34569, 37593] DDE_Tnp_1 RVT-GII PRK06760 Neighborhood of RT #2 [44942, 50980] PRK13922 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 34569-34784 bp Feature: domain Description: DDE_Tnp_1 Location: 34593-34776 bp Feature: domain Description: DDE_Tnp_1 Location: 34593-34776 bp Feature: gene Location: 34843-35100 bp Feature: gene Location: 35604-36026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35607-35952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35607-35952 bp Feature: gene Location: 36939-37103 bp Feature: gene Location: 37120-37593 bp Feature: domain Description: PRK06760 Location: 37123-37573 bp Feature: domain Description: PRK06760 Location: 3712 3-37573 bp Feature: gene Location: 44942-45091 bp Feature: gene Location: 45522-46286 bp Feature: domain Description: PRK13922 Location: 45618-46281 bp Feature: domain Description: PRK1392 2 Location: 45618-462 81 bp Feature: gene Location: 46572-48281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46734-47556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46734-47556 bp Feature: domain Description: Intron_maturas2 Location: 47637-47931 bp Feature: domain Description: Intron_maturas2 Location: 47637-47931 bp Feature: domain Description: HNHc Note: nucleases Location: 48078-48252 bp Feature: domain Description: HNHc Note: nucleases Location: 48078-482 52 bp Feature: gene Location: 48981-50492 bp Feature: gene Location: 50510-50980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, PRK06760 (hypothetical protein; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUGP01000209.1 Bacillus thuringiensis strain AFS055470 AFS055470_102_D7_Contig209_140514, whole genome shotgun sequence (33846 bp)
Overview 1 RT 1: 24584-31434 bp Neighborhood of RT #1 [24584, 31434] RVT_N RVT-GII GIIM HNHc DEXDc Feature: gene Location: 24584-25297 bp Feature: gene Location: 25314-26021 bp Feature: gene Location: 26138-27946 bp Feature: domain Description: RVT_N Location: 26189-26429 bp Feature: domain Description: RVT_N Location: 26189-26429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26489-27143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26489-27143 bp Feature: domain Description: GIIM Note: maturase Location: 27206-27440 bp Feature: domain Description: GIIM Note: maturase Location: 27206-27440 bp Feature: domain Description: HNHc Note: nucleases Location: 27653-27800 bp Feature: domain Description: HNHc Note: nucleases Location: 27653 -27800 bp Feature: gene Location: 28550-31183 bp Feature: domain Description: DEXDc Location: 29378-30329 bp Feature: domain Description: DEXDc Location: 293 78-3 03 29 bp Feature: gene Location: 31207-31434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXDc (smart00487)

Seq: NUGP01000422.1 Bacillus thuringiensis strain AFS055470 AFS055470_102_D7_Contig422_140514, whole genome shotgun sequence (2685 bp)
Overview 1 RT 1: 96-2422 bp Neighborhood of RT #1 [96, 2422] RVT-GII HNHc Feature: gene Location: 96-1892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-1059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354 -1059 bp Feature: domain Description: HNHc Note: nucleases Location: 1620-1755 bp Feature: domain Description: HNHc Note: nucleases Location: 1620-1755 bp Feature: gene Location: 2204-2422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)