myRT

myRT report for GCA_002575195.1_ASM257519v1

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Seq: NUHN01000116.1 Bacillus thuringiensis strain AFS053253 AFS053253_73_E9_Contig116_140411, whole genome shotgun sequence (23145 bp)
Overview 1 RT 1: 3921-6455 bp 2 RT 2: 14875-19295 bp Neighborhood of RT #1 [3921, 6455] DDE_Tnp_1 RVT-GII Neighborhood of RT #2 [14875, 19360] PRK13922 KOG4768 RVT-GII Intron_maturas2 Rve Rve Feature: gene Location: 3921-4136 bp Feature: domain Description: DDE_Tnp_1 Location: 3945-4128 bp Feature: domain Description: DDE_Tnp_1 Location: 3945-41 28 bp Feature: gene Location: 4195-4452 bp Feature: gene Location: 4956-5378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4959-5304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4959-5304 bp Feature: gene Location: 5582-5965 bp Feature: gene Location: 6291-6455 bp Feature: gene Location: 14875-15639 bp Feature: domain Description: PRK13922 Location: 14971-15634 bp Feature: domain Description: PRK1 3922 Location: 1 4971 -1 5634 bp Feature: gene Location: 15925-16338 bp Feature: domain Description: KOG4768 Location: 15934-16333 bp Feature: domain Description: KOG4768 Location: 1 5934-1 6333 bp Feature: gene Location: 16350-17738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16620-17442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6620-1 7442 bp Feature: domain Description: Intron_maturas2 Location: 17523-17718 bp Feature: domain Description: Intron_maturas2 Location: 1 7523-1 771 8 bp Feature: gene Location: 18660-18818 bp Feature: domain Description: Rve Location: 18678-18816 bp Feature: domain Description: Rve Location: 1 8678-1 881 6 bp Feature: gene Location: 19118-19360 bp Feature: domain Description: Rve Location: 19130-19295 bp Feature: domain Description: Rve Location: 1 91 30-1 9295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, PRK13922 (rod shape-determining protein MreC; Provisional), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), Intron_maturas2 (pfam01348), Rve (COG3316)

Seq: NUHN01000191.1 Bacillus thuringiensis strain AFS053253 AFS053253_73_E9_Contig191_140411, whole genome shotgun sequence (19483 bp)
Overview 1 RT 1: 6236-11981 bp Neighborhood of RT #1 [6236, 12835] RVT_N RVT-GII GIIM HNHc DEXDc Feature: gene Location: 6236-6949 bp Feature: gene Location: 6966-7673 bp Feature: gene Location: 7790-9598 bp Feature: domain Description: RVT_N Location: 7841-8081 bp Feature: domain Description: RVT_N Location: 7841-8081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-8795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8141-8795 bp Feature: domain Description: GIIM Note: maturase Location: 8858-9092 bp Feature: domain Description: GIIM Note: maturase Location: 8858-9092 bp Feature: domain Description: HNHc Note: nucleases Location: 9305-9452 bp Feature: domain Description: HNHc Note: nucleases Location: 9305-9452 bp Feature: gene Location: 9944-10174 bp Feature: gene Location: 10202-12835 bp Feature: domain Description: DEXDc Location: 11030-11981 bp Feature: domain Description: DEXDc Location: 11030-11981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXDc (smart00487)

Seq: NUHN01000022.1 Bacillus thuringiensis strain AFS053253 AFS053253_73_E9_Contig22_140411, whole genome shotgun sequence (33783 bp)
Overview 1 RT 1: 12027-14847 bp Neighborhood of RT #1 [12027, 14951] RVT-GII RVT-GII Peptidases_S8_Subtilisin_subset Feature: gene Location: 12027-12296 bp Feature: gene Location: 12318-12470 bp Feature: gene Location: 12606-12872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12624-12843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12624-12843 bp Feature: gene Location: 12908-13432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12911-13253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12911-13 253 bp Feature: gene Location: 13503-13700 bp Feature: gene Location: 13980-14951 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 14199-14847 bp Feature: domain Description: Peptidases_S8_Subtilisin_subset Location: 14199-14847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Peptidases_S8_Subtilisin_subset (cd07477)