myRT

myRT report for GCA_002575205.1_ASM257520v1

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Seq: NUHO01000104.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig104_140618, whole genome shotgun sequence (10172 bp)
Overview 1 RT 1: 5980-10156 bp Neighborhood of RT #1 [5980, 10170] HTH_XRE TED COG4932 SpaA SpaA SpaA RVT-GII Feature: gene Location: 5980-6213 bp Feature: domain Description: HTH_XRE Location: 6007-6172 bp Feature: domain Description: HTH_XRE Location: 6007-61 72 bp Feature: gene Location: 6395-8554 bp Feature: domain Description: TED Location: 6596-6860 bp Feature: domain Description: TED Location: 6596-6860 bp Feature: domain Description: COG4932 Location: 6950-7754 bp Feature: domain Description: COG4932 Location: 6950-7754 bp Feature: domain Description: SpaA Location: 7829-8030 bp Feature: domain Description: SpaA Location: 7829-8030 bp Feature: domain Description: SpaA Location: 8105-8303 bp Feature: domain Description: SpaA Location: 81 05-8303 bp Feature: domain Description: SpaA Location: 8381-8537 bp Feature: domain Description: SpaA Location: 8381 -8537 bp Feature: gene Location: 9379-10170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9589-10156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9589-1 01 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), TED (pfam08341), COG4932 (Uncharacterized surface anchored protein ), SpaA (pfam17802), RVT-GII

Seq: NUHO01000112.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig112_140618, whole genome shotgun sequence (53104 bp)
Overview 1 RT 1: 9841-17096 bp Neighborhood of RT #1 [9841, 17101] RVT-GII GIIM HNHc Ftsk_gamma Ftsk_gamma XRE Feature: gene Location: 9841-10239 bp Feature: gene Location: 10257-11936 bp Feature: gene Location: 12608-14482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12908-13613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 908-13613 bp Feature: domain Description: GIIM Note: maturase Location: 13727-13895 bp Feature: domain Description: GIIM Note: maturase Location: 1372 7-13895 bp Feature: domain Description: HNHc Note: nucleases Location: 14243-14408 bp Feature: domain Description: HNHc Note: nucleases Location: 142 43-14408 bp Feature: gene Location: 14856-16571 bp Feature: domain Description: Ftsk_gamma Location: 15483-15663 bp Feature: domain Description: Ftsk_gamma Location: 15483-15663 bp Feature: domain Description: Ftsk_gamma Location: 15816-15969 bp Feature: domain Description: Ftsk_gamma Location: 15816-15969 bp Feature: gene Location: 16790-17101 bp Feature: domain Description: XRE Location: 16910-17096 bp Feature: domain Description: XRE Location: 16910-17096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), Ftsk_gamma (smart00843), XRE (COG1476)

Seq: NUHO01000211.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig164_140618, whole genome shotgun sequence (1079 bp)
Overview 1 RT 1: 3-861 bp Neighborhood of RT #1 [3, 977] RVT-GII HNHc Feature: gene Location: 3-977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-171 bp Feature: domain Description: HNHc Note: nucleases Location: 726-861 bp Feature: domain Description: HNHc Note: nucleases Location: 726-861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUHO01000285.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig213_140618, whole genome shotgun sequence (1644 bp)
Overview 1 RT 1: 3-1411 bp Neighborhood of RT #1 [3, 1411] RVT-GII Feature: gene Location: 3-863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-861 bp Feature: gene Location: 1277-1411 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUHO01000151.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig266_140618, whole genome shotgun sequence (10246 bp)
Overview 1 RT 1: 3-3944 bp Neighborhood of RT #1 [3, 3944] RVT-GII Peptidase_S78 major_cap_HK97 Feature: gene Location: 3-818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264-816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 264-816 bp Feature: gene Location: 1605-3119 bp Feature: domain Description: Peptidase_S78 Location: 1620-1956 bp Feature: domain Description: Peptidase_S78 Location: 1620-195 6 bp Feature: domain Description: major_cap_HK97 Location: 1989-2916 bp Feature: domain Description: major_cap_HK97 Location: 1989-2916 bp Feature: gene Location: 3285-3944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Peptidase_S78 (pfam04586), major_cap_HK97 (TIGR01554)

Seq: NUHO01000054.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig54_140618, whole genome shotgun sequence (383 bp)
Overview 1 RT 1: 3-168 bp Neighborhood of RT #1 [3, 383] RVT-GII Feature: gene Location: 3-383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33-168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33-16 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUHO01000057.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig57_140618, whole genome shotgun sequence (10072 bp)
Overview 1 RT 1: 5888-9386 bp Neighborhood of RT #1 [5888, 9386] group_II_RT_mat RVT-GII GIIM Rep_trans Feature: gene Location: 5888-6283 bp Feature: gene Location: 7025-7243 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7028-7205 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7 028-7 205 bp Feature: gene Location: 7252-7674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7297-7390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 297 -7 390 bp Feature: domain Description: GIIM Note: maturase Location: 7450-7657 bp Feature: domain Description: GIIM Note: maturase Location: 7 450-7 657 bp Feature: gene Location: 7920-9107 bp Feature: domain Description: Rep_trans Location: 8607-8799 bp Feature: domain Description: Rep_trans Location: 8607 -87 99 bp Feature: gene Location: 9192-9386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), Rep_trans (pfam02486)

Seq: NUHO01000065.1 Bacillus cereus strain AFS053130 AFS053130_93_A4_Contig65_140618, whole genome shotgun sequence (1867 bp)
Overview 1 RT 1: 547-1717 bp Neighborhood of RT #1 [547, 1809] RVT-GII GIIM Feature: gene Location: 547-1809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1408 bp Feature: domain Description: GIIM Note: maturase Location: 1489-1717 bp Feature: domain Description: GIIM Note: maturase Location: 148 9-1717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)