myRT

myRT report for GCA_002575685.1_ASM257568v1

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Seq: NUIN01000001.1 Bacillus megaterium strain AFS049546 AFS049546_53_D7_Contig1_140312, whole genome shotgun sequence (1186041 bp)
Overview 1 RT 1: 745675-750066 bp Neighborhood of RT #1 [745675, 750104] DAO RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 745675-746772 bp Feature: domain Description: DAO Location: 745819-746767 bp Feature: domain Description: DAO Location: 74581 9-746767 bp Feature: gene Location: 746947-747243 bp Feature: gene Location: 747345-749168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747609-748443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747609-748443 bp Feature: domain Description: Intron_maturas2 Location: 748515-748815 bp Feature: domain Description: Intron_maturas2 Location: 74851 5-74881 5 bp Feature: domain Description: HNHc Note: nucleases Location: 748989-749142 bp Feature: domain Description: HNHc Note: nucleases Location: 748989-7491 42 bp Feature: gene Location: 749172-749336 bp Feature: gene Location: 749532-750104 bp Feature: domain Description: RimL Location: 749538-750066 bp Feature: domain Description: RimL Location: 749538-750066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAO (pfam01266), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670)

Seq: NUIN01000026.1 Bacillus megaterium strain AFS049546 AFS049546_53_D7_Contig26_140312, whole genome shotgun sequence (19569 bp)
Overview 1 RT 1: 13552-17870 bp Neighborhood of RT #1 [13552, 17870] RVT_N RVT-GII GIIM DUF4046 DUF4046 Feature: gene Location: 13552-13722 bp Feature: gene Location: 13889-14128 bp Feature: gene Location: 14150-15538 bp Feature: RT Description: RVT_N Location: 14198-14441 bp Feature: RT Description: RVT_N Location: 14198-14441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14498-15158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14498-15158 bp Feature: domain Description: GIIM Note: maturase Location: 15224-15458 bp Feature: domain Description: GIIM Note: maturase Location: 152 2 4-15458 bp Feature: gene Location: 16773-17549 bp Feature: domain Description: DUF4046 Location: 16791-16977 bp Feature: domain Description: DUF4046 Location: 16791-16977 bp Feature: domain Description: DUF4046 Location: 17058-17220 bp Feature: domain Description: DUF4046 Location: 17058-172 2 0 bp Feature: gene Location: 17637-17870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4046 (pfam13255)

Seq: NUIN01000005.1 Bacillus megaterium strain AFS049546 AFS049546_53_D7_Contig5_140312, whole genome shotgun sequence (947765 bp)
Overview 1 RT 1: 861704-865428 bp Neighborhood of RT #1 [861704, 865445] YdeN RVT-GII GIIM DUF3231 DUF3231 Feature: gene Location: 861704-862270 bp Feature: domain Description: YdeN Location: 861713-862262 bp Feature: domain Description: YdeN Location: 861713 -862262 bp Feature: gene Location: 862677-862811 bp Feature: gene Location: 862913-863731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862919-863555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 862919-863 555 bp Feature: domain Description: GIIM Note: maturase Location: 863621-863729 bp Feature: domain Description: GIIM Note: maturase Location: 863 621-863 729 bp Feature: gene Location: 863765-864196 bp Feature: gene Location: 864441-865445 bp Feature: domain Description: DUF3231 Location: 864456-864912 bp Feature: domain Description: DUF3 23 1 Location: 864456-864912 bp Feature: domain Description: DUF3231 Location: 864948-865428 bp Feature: domain Description: DUF3 23 1 Location: 864948-865428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdeN (COG3545), RVT-GII, GIIM (pfam08388), DUF3231 (pfam11553)

Seq: NUIN01000009.1 Bacillus megaterium strain AFS049546 AFS049546_53_D7_Contig9_140312, whole genome shotgun sequence (59653 bp)
Overview 1 RT 1: 1-8241 bp Neighborhood of RT #1 [1, 8258] RVT_N RVT-GII GIIM HxlR MdaB RVT_N RVT-GII GIIM PRK06126 PRK06126 Feature: gene Location: 1-162 bp Feature: gene Location: 572-2257 bp Feature: RT Description: RVT_N Location: 656-902 bp Feature: RT Description: RVT_N Location: 656-902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956-1616 bp Feature: domain Description: GIIM Note: maturase Location: 1685-1916 bp Feature: domain Description: GIIM Note: maturase Location: 1685-1916 bp Feature: gene Location: 2289-2501 bp Feature: gene Location: 2540-2908 bp Feature: domain Description: HxlR Location: 2594-2885 bp Feature: domain Description: HxlR Location: 2594 -2885 bp Feature: gene Location: 2981-3508 bp Feature: domain Description: MdaB Location: 2984-3500 bp Feature: domain Description: MdaB Location: 2984 -3500 bp Feature: gene Location: 4330-6015 bp Feature: RT Description: RVT_N Location: 4414-4660 bp Feature: RT Description: RVT_N Location: 4 4 14 -4 660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4714-5374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 714 -5374 bp Feature: domain Description: GIIM Note: maturase Location: 5440-5674 bp Feature: domain Description: GIIM Note: maturase Location: 54 4 0-5674 bp Feature: gene Location: 6212-6349 bp Feature: gene Location: 6609-8258 bp Feature: domain Description: PRK06126 Location: 6648-7773 bp Feature: domain Description: PRK06126 Location: 664 8-7773 bp Feature: domain Description: PRK06126 Location: 7812-8241 bp Feature: domain Description: PRK06126 Location: 7812-824 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MdaB (COG2249), PRK06126 (hypothetical protein; Provisional)