myRT

myRT report for GCA_002575965.1_ASM257596v1

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Seq: NUJJ01000057.1 Bacillus cereus strain AFS047135 AFS047135_109_F8_Contig57_140523, whole genome shotgun sequence (37854 bp)
Overview 1 RT 1: 4263-7245 bp Neighborhood of RT #1 [4263, 7245] RVT-GII GIIM Feature: gene Location: 4263-4436 bp Feature: gene Location: 4700-4879 bp Feature: gene Location: 5029-6360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5338-5977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5338-5977 bp Feature: domain Description: GIIM Note: maturase Location: 6052-6277 bp Feature: domain Description: GIIM Note: maturase Location: 6052-6277 bp Feature: gene Location: 6636-6893 bp Feature: gene Location: 7066-7245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NUJJ01000072.1 Bacillus cereus strain AFS047135 AFS047135_109_F8_Contig72_140523, whole genome shotgun sequence (20882 bp)
Overview 1 RT 1: 3244-8711 bp Neighborhood of RT #1 [3244, 8728] CwlT_like NlpD Spr RVT-GII HNHc CwlT_like Feature: gene Location: 3244-3819 bp Feature: gene Location: 3836-4939 bp Feature: domain Description: CwlT_like Location: 3866-4052 bp Feature: domain Description: CwlT_like Location: 3866-4052 bp Feature: domain Description: NlpD Location: 4079-4511 bp Feature: domain Description: NlpD Location: 4079-4511 bp Feature: domain Description: Spr Location: 4547-4880 bp Feature: domain Description: Spr Location: 4547-4880 bp Feature: gene Location: 5005-6801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5263-5968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 63-5968 bp Feature: domain Description: HNHc Note: nucleases Location: 6529-6664 bp Feature: domain Description: HNHc Note: nucleases Location: 652 9-6664 bp Feature: gene Location: 7113-7331 bp Feature: gene Location: 7574-8728 bp Feature: domain Description: CwlT_like Location: 8426-8711 bp Feature: domain Description: CwlT_like Location: 842 6-8711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, NlpD (COG0739), Spr (COG0791), RVT-GII, HNHc (smart00507)

Seq: NUJJ01000083.1 Bacillus cereus strain AFS047135 AFS047135_109_F8_Contig83_140523, whole genome shotgun sequence (54050 bp)
Overview 1 RT 1: 24262-28824 bp Neighborhood of RT #1 [24262, 28824] RVT-UG15 HEPN_RiboL-PSP Feature: gene Location: 24262-24783 bp Feature: gene Location: 24874-25599 bp Feature: gene Location: 25873-27417 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 26341-26740 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 263 41-26740 bp Feature: gene Location: 27506-28201 bp Feature: domain Description: HEPN_RiboL-PSP Location: 27926-28067 bp Feature: domain Description: HEPN_RiboL-PSP Location: 27926-28067 bp Feature: gene Location: 28315-28824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG15, HEPN_RiboL-PSP (pfam18735)

Seq: NUJJ01000084.1 Bacillus cereus strain AFS047135 AFS047135_109_F8_Contig84_140523, whole genome shotgun sequence (27246 bp)
Overview 1 RT 1: 7630-15258 bp Neighborhood of RT #1 [7630, 15258] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII Intron_maturas2 HNHc Feature: gene Location: 7630-8613 bp Feature: domain Description: rpsA Location: 7897-8434 bp Feature: domain Description: rpsA Location: 7897-84 34 bp Feature: gene Location: 8872-10653 bp Feature: domain Description: TraG-D_C Location: 8923-9283 bp Feature: domain Description: TraG-D_C Location: 8923-9283 bp Feature: domain Description: Ftsk_gamma Location: 9643-9823 bp Feature: domain Description: Ftsk_gamma Location: 964 3-9823 bp Feature: domain Description: Ftsk_gamma Location: 9976-10150 bp Feature: domain Description: Ftsk_gamma Location: 9976-10150 bp Feature: gene Location: 10847-12556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11009-11834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11009-11834 bp Feature: domain Description: Intron_maturas2 Location: 11912-12206 bp Feature: domain Description: Intron_maturas2 Location: 11912-12206 bp Feature: domain Description: HNHc Note: nucleases Location: 12353-12527 bp Feature: domain Description: HNHc Note: nucleases Location: 12353-12527 bp Feature: gene Location: 13256-14767 bp Feature: gene Location: 14785-15258 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)