myRT

myRT report for GCA_002576025.1_ASM257602v1

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Seq: NUJM01000027.1 Bacillus thuringiensis strain AFS046545 AFS046545_119_B7_Contig27_140618, whole genome shotgun sequence (150912 bp)
Overview 1 RT 1: 34138-42999 bp Neighborhood of RT #1 [34138, 43043] bZIP AE_Prim_S_like RVT-UG10 INT_ICEBs1_C_like Feature: gene Location: 34138-34317 bp Feature: domain Description: bZIP Location: 34174-34267 bp Feature: domain Description: bZIP Location: 341 74-34267 bp Feature: gene Location: 34590-34769 bp Feature: gene Location: 35721-41360 bp Feature: domain Description: AE_Prim_S_like Location: 35868-36150 bp Feature: domain Description: AE_Prim_S_like Location: 35868-361 50 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 37137-37791 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 371 37-37791 bp Feature: gene Location: 42640-42792 bp Feature: gene Location: 42852-43043 bp Feature: domain Description: INT_ICEBs1_C_like Location: 42858-42999 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 42858-42999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bZIP (cl21462), AE_Prim_S_like (cl01287), RVT-UG10, INT_ICEBs1_C_like (cd01189)

Seq: NUJM01000062.1 Bacillus thuringiensis strain AFS046545 AFS046545_119_B7_Contig62_140618, whole genome shotgun sequence (60215 bp)
Overview 1 RT 1: 48240-51472 bp Neighborhood of RT #1 [48240, 51492] DDE_Tnp_1 RVT-GII PRK06760 Feature: gene Location: 48240-48455 bp Feature: domain Description: DDE_Tnp_1 Location: 48264-48447 bp Feature: domain Description: DDE_Tnp_1 Location: 482 64-48447 bp Feature: gene Location: 48514-48771 bp Feature: gene Location: 49275-49697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49278-49638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 492 78-49638 bp Feature: gene Location: 50610-50774 bp Feature: gene Location: 50791-51492 bp Feature: domain Description: PRK06760 Location: 50794-51472 bp Feature: domain Description: PRK06760 Location: 50794-51472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, PRK06760 (hypothetical protein; Provisional)

Seq: NUJM01000069.1 Bacillus thuringiensis strain AFS046545 AFS046545_119_B7_Contig69_140618, whole genome shotgun sequence (30311 bp)
Overview 1 RT 1: 2199-10739 bp Neighborhood of RT #1 [2199, 11593] RVT-GII HNHc RVT_N RVT-GII GIIM HNHc DEXDc Feature: gene Location: 2199-2912 bp Feature: gene Location: 2929-3600 bp Feature: gene Location: 3798-5696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4122-4860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4122-4860 bp Feature: domain Description: HNHc Note: nucleases Location: 5433-5586 bp Feature: domain Description: HNHc Note: nucleases Location: 543 3 -5586 bp Feature: gene Location: 6548-8356 bp Feature: domain Description: RVT_N Location: 6599-6839 bp Feature: domain Description: RVT_N Location: 6599-683 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6899-7553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6899-7553 bp Feature: domain Description: GIIM Note: maturase Location: 7616-7850 bp Feature: domain Description: GIIM Note: maturase Location: 7616-7850 bp Feature: domain Description: HNHc Note: nucleases Location: 8063-8210 bp Feature: domain Description: HNHc Note: nucleases Location: 8063 -8210 bp Feature: gene Location: 8702-8932 bp Feature: gene Location: 8960-11593 bp Feature: domain Description: DEXDc Location: 9788-10739 bp Feature: domain Description: DEXDc Location: 9788-1073 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), RVT_N (pfam13655), GIIM (pfam08388), DEXDc (smart00487)

Seq: NUJM01000079.1 Bacillus thuringiensis strain AFS046545 AFS046545_119_B7_Contig79_140618, whole genome shotgun sequence (2493 bp)
Overview 1 RT 1: 49-1837 bp Neighborhood of RT #1 [49, 1866] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 49-1866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-1144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-114 4 bp Feature: domain Description: Intron_maturas2 Location: 1222-1516 bp Feature: domain Description: Intron_maturas2 Location: 1222-1516 bp Feature: domain Description: HNHc Note: nucleases Location: 1663-1837 bp Feature: domain Description: HNHc Note: nucleases Location: 1663-1837 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)