myRT

myRT report for GCA_002576155.1_ASM257615v1

Download annotations/find similar RTs

Seq: NUJY01000133.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig133_140404, whole genome shotgun sequence (22955 bp)
Overview 1 RT 1: 581-4898 bp Neighborhood of RT #1 [581, 4936] RVT-GII 2a38 DUF2207 Feature: gene Location: 581-784 bp Feature: gene Location: 907-2712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1102-1837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 02-1 837 bp Feature: gene Location: 3111-4496 bp Feature: domain Description: 2a38 Location: 3261-4407 bp Feature: domain Description: 2a38 Location: 3261 -4407 bp Feature: gene Location: 4532-4936 bp Feature: domain Description: DUF2207 Location: 4580-4898 bp Feature: domain Description: DUF2207 Location: 4580-4898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, 2a38 (TIGR00933), DUF2207 (pfam09972)

Seq: NUJY01000141.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig141_140404, whole genome shotgun sequence (8113 bp)
Overview 1 RT 1: 588-2546 bp Neighborhood of RT #1 [588, 2546] RVT-GII Intron_maturas2 KOG4768 Feature: gene Location: 588-2102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852 -1686 bp Feature: domain Description: Intron_maturas2 Location: 1755-2079 bp Feature: domain Description: Intron_maturas2 Location: 1755-2 079 bp Feature: gene Location: 2135-2410 bp Feature: domain Description: KOG4768 Location: 2231-2402 bp Feature: domain Description: KOG4768 Location: 2 2 31-2 402 bp Feature: gene Location: 2412-2546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: NUJY01000181.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig181_140404, whole genome shotgun sequence (12702 bp)
Overview 1 RT 1: 9408-12114 bp Neighborhood of RT #1 [9408, 12701] TraG-D_C Ftsk_gamma RVT-GII GIIM Feature: gene Location: 9408-9635 bp Feature: gene Location: 9794-11476 bp Feature: domain Description: TraG-D_C Location: 9806-10124 bp Feature: domain Description: TraG-D_C Location: 9806-10124 bp Feature: domain Description: Ftsk_gamma Location: 10529-10709 bp Feature: domain Description: Ftsk_gamma Location: 10529-10709 bp Feature: gene Location: 11709-12701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11718-11832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11718-1183 2 bp Feature: domain Description: GIIM Note: maturase Location: 11946-12114 bp Feature: domain Description: GIIM Note: maturase Location: 11946-12114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388)

Seq: NUJY01000182.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig182_140404, whole genome shotgun sequence (14185 bp)
Overview 1 RT 1: 8240-14184 bp Neighborhood of RT #1 [8240, 14184] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM Feature: gene Location: 8240-9223 bp Feature: domain Description: rpsA Location: 8507-9044 bp Feature: domain Description: rpsA Location: 8507-904 4 bp Feature: gene Location: 9482-11182 bp Feature: domain Description: TraG-D_C Location: 9494-9812 bp Feature: domain Description: TraG-D_C Location: 94 94 -9812 bp Feature: domain Description: Ftsk_gamma Location: 10172-10352 bp Feature: domain Description: Ftsk_gamma Location: 10172-10352 bp Feature: domain Description: Ftsk_gamma Location: 10505-10679 bp Feature: domain Description: Ftsk_gamma Location: 10505-10679 bp Feature: gene Location: 11415-13358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11784-12489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11784 -124 89 bp Feature: domain Description: GIIM Note: maturase Location: 12582-12771 bp Feature: domain Description: GIIM Note: maturase Location: 12582-12771 bp Feature: gene Location: 13963-14184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388)

Seq: NUJY01000188.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig188_140404, whole genome shotgun sequence (8916 bp)
Overview 1 RT 1: 319-3675 bp Neighborhood of RT #1 [319, 3839] RVT-GII HNHc TraC-F-type Feature: gene Location: 319-453 bp Feature: gene Location: 747-2579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047-175 2 bp Feature: domain Description: HNHc Note: nucleases Location: 2331-2463 bp Feature: domain Description: HNHc Note: nucleases Location: 2331-2463 bp Feature: gene Location: 2681-2935 bp Feature: gene Location: 2880-3839 bp Feature: domain Description: TraC-F-type Location: 2898-3675 bp Feature: domain Description: TraC-F-type Location: 2898-3675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746)

Seq: NUJY01000283.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig283_140404, whole genome shotgun sequence (1399 bp)
Overview 1 RT 1: 104-1367 bp Neighborhood of RT #1 [104, 1396] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 104-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107-671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107-6 71 bp Feature: domain Description: Intron_maturas2 Location: 752-1046 bp Feature: domain Description: Intron_maturas2 Location: 752-1046 bp Feature: domain Description: HNHc Note: nucleases Location: 1193-1367 bp Feature: domain Description: HNHc Note: nucleases Location: 1193-136 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUJY01000032.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig32_140404, whole genome shotgun sequence (14999 bp)
Overview 1 RT 1: 2-5828 bp Neighborhood of RT #1 [2, 5828] HELICc RVT-GII Intron_maturas2 HNHc DEXDc Feature: gene Location: 2-1234 bp Feature: domain Description: HELICc Location: 494-893 bp Feature: domain Description: HELICc Location: 494-893 bp Feature: gene Location: 1388-3223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1655-2486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1655-2486 bp Feature: domain Description: Intron_maturas2 Location: 2555-2930 bp Feature: domain Description: Intron_maturas2 Location: 2555-2930 bp Feature: domain Description: HNHc Note: nucleases Location: 3023-3170 bp Feature: domain Description: HNHc Note: nucleases Location: 3023-317 0 bp Feature: gene Location: 3826-5628 bp Feature: domain Description: DEXDc Location: 4651-5605 bp Feature: domain Description: DEXDc Location: 4651-5605 bp Feature: gene Location: 5652-5828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEXDc (smart00487)

Seq: NUJY01000338.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig338_140404, whole genome shotgun sequence (1921 bp)
Overview 1 RT 1: 2-1902 bp Neighborhood of RT #1 [2, 1919] RVT-GII CwlT_like Feature: gene Location: 2-1021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-965 bp Feature: gene Location: 1333-1551 bp Feature: gene Location: 1794-1919 bp Feature: domain Description: CwlT_like Location: 1800-1902 bp Feature: domain Description: CwlT_like Location: 18 00-1902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CwlT_like

Seq: NUJY01000372.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig372_140404, whole genome shotgun sequence (1593 bp)
Overview 1 RT 1: 2-1591 bp Neighborhood of RT #1 [2, 1590] RVT-GII Feature: gene Location: 2-223 bp Feature: gene Location: 895-1590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1195-1591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119 5-159 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUJY01000392.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig392_140404, whole genome shotgun sequence (1168 bp)
Overview 1 RT 1: 628-1168 bp Neighborhood of RT #1 [628, 1167] RVT-GII Feature: gene Location: 628-1167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1168 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUJY01000039.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig39_140404, whole genome shotgun sequence (3604 bp)
Overview 1 RT 1: 77-2876 bp Neighborhood of RT #1 [77, 2959] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 77-1147 bp Feature: domain Description: DDE_Tnp_1 Location: 446-1133 bp Feature: domain Description: DDE_Tnp_1 Location: 446-11 33 bp Feature: gene Location: 1299-1478 bp Feature: gene Location: 1628-2959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1937-2576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1937-2576 bp Feature: domain Description: GIIM Note: maturase Location: 2651-2876 bp Feature: domain Description: GIIM Note: maturase Location: 2651-2876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: NUJY01000644.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig644_140404, whole genome shotgun sequence (220 bp)
Overview 1 RT 1: 1-214 bp Neighborhood of RT #1 [1, 219] RVT-GII Feature: gene Location: 1-219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUJY01000645.1 Bacillus cereus strain AFS045441 AFS045441_68_G4_Contig645_140404, whole genome shotgun sequence (220 bp)
Overview 1 RT 1: 1-211 bp Neighborhood of RT #1 [1, 219] RVT-GII Feature: gene Location: 1-219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII