myRT

myRT report for GCA_002577255.1_ASM257725v1

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Seq: NULJ01000040.1 Bacillus thuringiensis strain AFS041586 AFS041586_65_D4_Contig40_140404, whole genome shotgun sequence (77673 bp)
Overview 1 RT 1: 5903-10544 bp Neighborhood of RT #1 [5903, 10544] Y1_Tnp DUF3854 RVT-GII GIIM Feature: gene Location: 5903-6301 bp Feature: domain Description: Y1_Tnp Location: 5936-6290 bp Feature: domain Description: Y1 _Tnp Location: 5936-6290 bp Feature: gene Location: 6471-6833 bp Feature: domain Description: DUF3854 Location: 6567-6801 bp Feature: domain Description: DUF3854 Location: 6567-6801 bp Feature: gene Location: 6943-8712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7159-7855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 59-7855 bp Feature: domain Description: GIIM Note: maturase Location: 7939-8113 bp Feature: domain Description: GIIM Note: maturase Location: 7939-81 1 3 bp Feature: gene Location: 9050-9238 bp Feature: gene Location: 9531-10544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), DUF3854 (pfam12965), RVT-GII, GIIM (pfam08388)

Seq: NULJ01000045.1 Bacillus thuringiensis strain AFS041586 AFS041586_65_D4_Contig45_140404, whole genome shotgun sequence (28116 bp)
Overview 1 RT 1: 23180-28103 bp Neighborhood of RT #1 [23180, 28114] PRK13922 PRK13927 RVT-GII HNHc RadC Feature: gene Location: 23180-24031 bp Feature: domain Description: PRK13922 Location: 23183-24011 bp Feature: domain Description: PRK1392 2 Location: 2 3183-2 4011 bp Feature: gene Location: 24073-25092 bp Feature: domain Description: PRK13927 Location: 24091-25081 bp Feature: domain Description: PRK1392 7 Location: 2 4091-2 5081 bp Feature: gene Location: 25414-27285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25735-26443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5735-2 6443 bp Feature: domain Description: HNHc Note: nucleases Location: 27037-27205 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7037-2 72 05 bp Feature: gene Location: 27986-28114 bp Feature: domain Description: RadC Location: 28007-28103 bp Feature: domain Description: RadC Location: 2 8007-2 8103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13922 (rod shape-determining protein MreC; Provisional), PRK13927 (rod shape-determining protein MreB; Provisional), RVT-GII, HNHc (smart00507), RadC (pfam04002)

Seq: NULJ01000071.1 Bacillus thuringiensis strain AFS041586 AFS041586_65_D4_Contig71_140404, whole genome shotgun sequence (2795 bp)
Overview 1 RT 1: 146-2427 bp Neighborhood of RT #1 [146, 2427] RVT-GII HNHc Feature: gene Location: 146-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443 -1184 bp Feature: domain Description: HNHc Note: nucleases Location: 1748-1916 bp Feature: domain Description: HNHc Note: nucleases Location: 1748-1916 bp Feature: gene Location: 2248-2427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)