myRT

myRT report for GCA_002577625.1_ASM257762v1

Download annotations/find similar RTs

Seq: NUMD01000094.1 Bacillus thuringiensis strain AFS040286 AFS040286_100_H12_Contig105_140514, whole genome shotgun sequence (11999 bp)
Overview 1 RT 1: 1991-9644 bp Neighborhood of RT #1 [1991, 9644] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII HNHc Feature: gene Location: 1991-2974 bp Feature: domain Description: rpsA Location: 2258-2795 bp Feature: domain Description: rpsA Location: 2258-2795 bp Feature: gene Location: 3209-5395 bp Feature: domain Description: TraG-D_C Location: 3584-3944 bp Feature: domain Description: TraG-D_C Location: 3584-3944 bp Feature: domain Description: Ftsk_gamma Location: 4370-4550 bp Feature: domain Description: Ftsk_gamma Location: 4370-4550 bp Feature: domain Description: Ftsk_gamma Location: 4718-4859 bp Feature: domain Description: Ftsk_gamma Location: 471 8-4859 bp Feature: gene Location: 5461-7251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5758-6454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5758-6454 bp Feature: domain Description: HNHc Note: nucleases Location: 6994-7126 bp Feature: domain Description: HNHc Note: nucleases Location: 6994-71 26 bp Feature: gene Location: 7930-9237 bp Feature: gene Location: 9255-9644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, HNHc (smart00507)

Seq: NUMD01000030.1 Bacillus thuringiensis strain AFS040286 AFS040286_100_H12_Contig30_140514, whole genome shotgun sequence (91629 bp)
Overview 1 RT 1: 37004-44518 bp Neighborhood of RT #1 [37004, 44532] RVT-Retrons HsdR HsdR HsdM Feature: gene Location: 37004-37204 bp Feature: gene Location: 37798-38703 bp Feature: gene Location: 38902-40083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39058-39619 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 39058-39619 bp Feature: gene Location: 40634-42967 bp Feature: domain Description: HsdR Location: 40640-42254 bp Feature: domain Description: HsdR Location: 40640-42 2 54 bp Feature: domain Description: HsdR Location: 42407-42962 bp Feature: domain Description: HsdR Location: 42 407-42 962 bp Feature: gene Location: 43078-44532 bp Feature: domain Description: HsdM Location: 43084-44518 bp Feature: domain Description: HsdM Location: 43084-44518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HsdR (COG4096), HsdM (COG0286)