myRT

myRT report for GCA_002578335.1_ASM257833v1

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Seq: NUMY01000050.1 Bacillus cereus strain AFS038126 AFS038126_95_A9_Contig50_140514, whole genome shotgun sequence (31819 bp)
Overview 1 RT 1: 2579-10912 bp Neighborhood of RT #1 [2579, 11169] RVT-UG8 RVT-UG3 HNH_4 COG3950 restrict_AAA_1 Feature: gene Location: 2579-3217 bp Feature: gene Location: 3459-3845 bp Feature: gene Location: 3932-5944 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4448-4892 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 4448-4892 bp Feature: gene Location: 6042-7295 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6294-6747 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 6294-6747 bp Feature: gene Location: 7922-9196 bp Feature: domain Description: HNH_4 Location: 8597-8765 bp Feature: domain Description: HNH_4 Location: 8597-8765 bp Feature: gene Location: 9193-11169 bp Feature: domain Description: COG3950 Location: 9361-9538 bp Feature: domain Description: COG3950 Location: 9361 -9538 bp Feature: domain Description: restrict_AAA_1 Location: 10579-10912 bp Feature: domain Description: restrict_AAA_1 Location: 1 0579-1 091 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, HNH_4 (pfam13395), COG3950 (Predicted ATP-binding protein involved in virulence ), restrict_AAA_1 (TIGR04435)

Seq: NUMY01000009.1 Bacillus cereus strain AFS038126 AFS038126_95_A9_Contig9_140514, whole genome shotgun sequence (62399 bp)
Overview 1 RT 1: 23028-27704 bp Neighborhood of RT #1 [23028, 27712] DUF3784 RVT-GII GIIM DDE_Tnp_1 LysR Feature: gene Location: 23028-23360 bp Feature: domain Description: DUF3784 Location: 23085-23331 bp Feature: domain Description: DUF3784 Location: 2 3085-2 3331 bp Feature: gene Location: 23395-23823 bp Feature: gene Location: 24090-25397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24375-25014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4375-2 5014 bp Feature: domain Description: GIIM Note: maturase Location: 25089-25314 bp Feature: domain Description: GIIM Note: maturase Location: 2 5089-2 5314 bp Feature: gene Location: 25684-26742 bp Feature: domain Description: DDE_Tnp_1 Location: 26041-26728 bp Feature: domain Description: DDE_Tnp_1 Location: 2 6041-2 672 8 bp Feature: gene Location: 26840-27712 bp Feature: domain Description: LysR Location: 26843-27704 bp Feature: domain Description: LysR Location: 2 6843-2 7704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3784 (pfam12650), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), LysR (COG0583)