myRT

myRT report for GCA_002579245.1_ASM257924v1

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Seq: NUQQ01000020.1 Bacillus toyonensis strain AFS056055 AFS056055_109_F3_Contig20_140523, whole genome shotgun sequence (20607 bp)
Overview 1 RT 1: 2031-7938 bp Neighborhood of RT #1 [2031, 8030] RVT-GII Intron_maturas2 HNHc VirB4_CagE AAA_10 TcpE Feature: gene Location: 2031-2513 bp Feature: gene Location: 2515-2667 bp Feature: gene Location: 2798-4606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3062-3887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3062-3887 bp Feature: domain Description: Intron_maturas2 Location: 3986-4277 bp Feature: domain Description: Intron_maturas2 Location: 3986-4277 bp Feature: domain Description: HNHc Note: nucleases Location: 4433-4580 bp Feature: domain Description: HNHc Note: nucleases Location: 4433-4580 bp Feature: gene Location: 5173-7566 bp Feature: domain Description: VirB4_CagE Location: 5200-6304 bp Feature: domain Description: VirB4_CagE Location: 5200-6304 bp Feature: domain Description: AAA_10 Location: 6514-7540 bp Feature: domain Description: AAA_1 0 Location: 651 4-7540 bp Feature: gene Location: 7626-8030 bp Feature: domain Description: TcpE Location: 7662-7938 bp Feature: domain Description: TcpE Location: 7662-7938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), VirB4_CagE (TIGR00929), AAA_10 (pfam12846), TcpE (pfam12648)

Seq: NUQQ01000002.1 Bacillus toyonensis strain AFS056055 AFS056055_109_F3_Contig2_140523, whole genome shotgun sequence (103141 bp)
Overview 1 RT 1: 79020-83704 bp Neighborhood of RT #1 [79020, 83704] RadC RVT-GII HNHc PRK00024 Feature: gene Location: 79020-79385 bp Feature: domain Description: RadC Location: 79050-79368 bp Feature: domain Description: RadC Location: 79050-79368 bp Feature: gene Location: 79730-79909 bp Feature: gene Location: 80128-82011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80425-81166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8042 5-81166 bp Feature: domain Description: HNHc Note: nucleases Location: 81730-81898 bp Feature: domain Description: HNHc Note: nucleases Location: 81730-81898 bp Feature: gene Location: 82170-82304 bp Feature: domain Description: PRK00024 Location: 82179-82299 bp Feature: domain Description: PRK0002 4 Location: 82 179-82 2 99 bp Feature: gene Location: 83150-83704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, HNHc (smart00507), PRK00024 (DNA repair protein RadC)

Seq: NUQQ01000056.1 Bacillus toyonensis strain AFS056055 AFS056055_109_F3_Contig56_140523, whole genome shotgun sequence (15481 bp)
Overview 1 RT 1: 3-5220 bp Neighborhood of RT #1 [3, 5220] CwlT_like RVT-GII HNHc CwlT_like Spr Feature: gene Location: 3-248 bp Feature: gene Location: 655-1293 bp Feature: domain Description: CwlT_like Location: 1030-1276 bp Feature: domain Description: CwlT_like Location: 103 0-1276 bp Feature: gene Location: 2137-3846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2323-3028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 23 -3 028 bp Feature: domain Description: HNHc Note: nucleases Location: 3592-3724 bp Feature: domain Description: HNHc Note: nucleases Location: 3 592-3 724 bp Feature: gene Location: 3859-4572 bp Feature: domain Description: CwlT_like Location: 3958-4147 bp Feature: domain Description: CwlT_like Location: 3 958-4147 bp Feature: domain Description: Spr Location: 4183-4555 bp Feature: domain Description: Spr Location: 4183 -4555 bp Feature: gene Location: 4624-5220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: NUQQ01000075.1 Bacillus toyonensis strain AFS056055 AFS056055_109_F3_Contig75_140523, whole genome shotgun sequence (12992 bp)
Overview 1 RT 1: 8600-12922 bp Neighborhood of RT #1 [8600, 12922] PRK09064 Mrr_cat RVT-GII Intron_maturas2 HNHc Feature: gene Location: 8600-9832 bp Feature: domain Description: PRK09064 Location: 8606-9809 bp Feature: domain Description: PRK09064 Location: 8606-9809 bp Feature: gene Location: 10008-10328 bp Feature: domain Description: Mrr_cat Location: 10014-10284 bp Feature: domain Description: Mrr_cat Location: 10014 -10284 bp Feature: gene Location: 10453-12267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10717-11551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10717-11551 bp Feature: domain Description: Intron_maturas2 Location: 11629-11965 bp Feature: domain Description: Intron_maturas2 Location: 11629-11965 bp Feature: domain Description: HNHc Note: nucleases Location: 12061-12241 bp Feature: domain Description: HNHc Note: nucleases Location: 12061-1224 1 bp Feature: gene Location: 12779-12922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK09064 (5-aminolevulinate synthase; Validated)