myRT

myRT report for GCA_002580565.1_ASM258056v1

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Seq: NURY01000110.1 Bacillus wiedmannii strain AFS049329 AFS049329_73_B9_Contig110_140411, whole genome shotgun sequence (11166 bp)
Overview 1 RT 1: 712-7305 bp Neighborhood of RT #1 [712, 7883] rpsA RVT-GII TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 712-1644 bp Feature: gene Location: 1648-2589 bp Feature: domain Description: rpsA Location: 1873-2410 bp Feature: domain Description: rpsA Location: 1 873-241 0 bp Feature: gene Location: 2772-4742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3093-3828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3093-3828 bp Feature: gene Location: 4749-4970 bp Feature: gene Location: 6099-7883 bp Feature: domain Description: TraG-D_C Location: 6111-6429 bp Feature: domain Description: TraG-D_C Location: 61 1 1 -6429 bp Feature: domain Description: Ftsk_gamma Location: 6840-7017 bp Feature: domain Description: Ftsk_gamma Location: 6840-701 7 bp Feature: domain Description: Ftsk_gamma Location: 7170-7305 bp Feature: domain Description: Ftsk_gamma Location: 71 70-7305 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), RVT-GII, TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: NURY01000121.1 Bacillus wiedmannii strain AFS049329 AFS049329_73_B9_Contig121_140411, whole genome shotgun sequence (20599 bp)
Overview 1 RT 1: 18306-20025 bp Neighborhood of RT #1 [18306, 20027] RseC_MucC RVT-GII Feature: gene Location: 18306-18920 bp Feature: gene Location: 19038-19217 bp Feature: domain Description: RseC_MucC Location: 19050-19212 bp Feature: domain Description: RseC_MucC Location: 19050-192 12 bp Feature: gene Location: 19347-20027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19605-20025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19605-2 002 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RseC_MucC (pfam04246), RVT-GII

Seq: NURY01000140.1 Bacillus wiedmannii strain AFS049329 AFS049329_73_B9_Contig140_140411, whole genome shotgun sequence (6932 bp)
Overview 1 RT 1: 2632-6930 bp Neighborhood of RT #1 [2632, 6930] DUF3854 RVT-GII HNHc Feature: gene Location: 2632-2856 bp Feature: gene Location: 2920-3711 bp Feature: domain Description: DUF3854 Location: 3340-3682 bp Feature: domain Description: DUF3 854 Location: 3 3 40-3 682 bp Feature: gene Location: 4572-6371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4869-5562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4869-5562 bp Feature: domain Description: HNHc Note: nucleases Location: 6120-6258 bp Feature: domain Description: HNHc Note: nucleases Location: 6120-6258 bp Feature: gene Location: 6688-6930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), RVT-GII, HNHc (smart00507)

Seq: NURY01000076.1 Bacillus wiedmannii strain AFS049329 AFS049329_73_B9_Contig76_140411, whole genome shotgun sequence (80265 bp)
Overview 1 RT 1: 55578-61599 bp Neighborhood of RT #1 [55578, 61599] RhaT VOC_Bs_YwkD_like RVT-GII HNHc Glyco_tranf_2_4 Feature: gene Location: 55578-56486 bp Feature: domain Description: RhaT Location: 55593-56442 bp Feature: domain Description: RhaT Location: 55593-564 4 2 bp Feature: gene Location: 56686-57111 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 56725-56998 bp Feature: domain Description: VOC_Bs_YwkD_like Location: 56725-56998 bp Feature: gene Location: 58090-59889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58387-59080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58387-59080 bp Feature: domain Description: HNHc Note: nucleases Location: 59638-59776 bp Feature: domain Description: HNHc Note: nucleases Location: 59638-59776 bp Feature: gene Location: 60056-60850 bp Feature: domain Description: Glyco_tranf_2_4 Location: 60095-60353 bp Feature: domain Description: Glyco_tranf_2_4 Location: 60095-60353 bp Feature: gene Location: 61426-61599 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhaT (TIGR00776), VOC_Bs_YwkD_like (cd08352), RVT-GII, HNHc (smart00507), Glyco_tranf_2_4 (pfam13704)