myRT

myRT report for GCA_002582165.1_ASM258216v1

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Seq: NUTE01000012.1 Bacillus pseudomycoides strain AFS040159 AFS040159_120_C10_Contig12_140618, whole genome shotgun sequence (16796 bp)
Overview 1 RT 1: 9388-14718 bp Neighborhood of RT #1 [9388, 14726] DUF4352 DUF5105 RVT-GII MFS_MefA_like RimL Feature: gene Location: 9388-10443 bp Feature: domain Description: DUF4352 Location: 9502-9823 bp Feature: domain Description: DUF4352 Location: 9502-9823 bp Feature: domain Description: DUF5105 Location: 9889-10438 bp Feature: domain Description: DUF51 05 Location: 9889-1 0438 bp Feature: gene Location: 10571-10729 bp Feature: gene Location: 10902-11399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11106-11220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 06-1 1 220 bp Feature: gene Location: 12415-13674 bp Feature: domain Description: MFS_MefA_like Location: 12463-13603 bp Feature: domain Description: MFS_MefA_like Location: 1 2463-1 3603 bp Feature: gene Location: 14172-14726 bp Feature: domain Description: RimL Location: 14199-14718 bp Feature: domain Description: RimL Location: 1 41 99-1 471 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MFS_MefA_like (cd06173), RimL (COG1670)

Seq: NUTE01000035.1 Bacillus pseudomycoides strain AFS040159 AFS040159_120_C10_Contig35_140618, whole genome shotgun sequence (23370 bp)
Overview 1 RT 1: 2152-7153 bp Neighborhood of RT #1 [2152, 7153] DUF1738 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2152-2427 bp Feature: gene Location: 2420-3130 bp Feature: domain Description: DUF1738 Location: 2645-2798 bp Feature: domain Description: DUF1738 Location: 2 645-2 798 bp Feature: gene Location: 3747-5600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4011-4851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4011-4851 bp Feature: domain Description: Intron_maturas2 Location: 4941-5289 bp Feature: domain Description: Intron_maturas2 Location: 4941-52 89 bp Feature: domain Description: HNHc Note: nucleases Location: 5382-5547 bp Feature: domain Description: HNHc Note: nucleases Location: 5382 -5547 bp Feature: gene Location: 5626-6948 bp Feature: gene Location: 6983-7153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1738 (pfam08401), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUTE01000058.1 Bacillus pseudomycoides strain AFS040159 AFS040159_120_C10_Contig58_140618, whole genome shotgun sequence (29074 bp)
Overview 1 RT 1: 2606-6733 bp Neighborhood of RT #1 [2606, 6747] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 2606-3025 bp Feature: gene Location: 3347-3583 bp Feature: gene Location: 3973-5184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4258-4897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4258-4897 bp Feature: domain Description: GIIM Note: maturase Location: 4972-5173 bp Feature: domain Description: GIIM Note: maturase Location: 4972-5173 bp Feature: gene Location: 5358-5537 bp Feature: gene Location: 5689-6747 bp Feature: domain Description: DDE_Tnp_1 Location: 6049-6733 bp Feature: domain Description: DDE_Tnp_1 Location: 6049-673 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: NUTE01000073.1 Bacillus pseudomycoides strain AFS040159 AFS040159_120_C10_Contig73_140618, whole genome shotgun sequence (10499 bp)
Overview 1 RT 1: 6179-10192 bp Neighborhood of RT #1 [6179, 10467] DUF3953 RVT_N RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 6179-6409 bp Feature: domain Description: DUF3953 Location: 6275-6395 bp Feature: domain Description: DUF3953 Location: 6275-6395 bp Feature: gene Location: 6557-6844 bp Feature: gene Location: 7240-8889 bp Feature: RT Description: RVT_N Location: 7288-7534 bp Feature: RT Description: RVT_N Location: 7288-7534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7588-8248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7588-824 8 bp Feature: domain Description: GIIM Note: maturase Location: 8314-8548 bp Feature: domain Description: GIIM Note: maturase Location: 8314 -854 8 bp Feature: gene Location: 9646-10467 bp Feature: domain Description: DDE_Tnp_1 Location: 9655-10192 bp Feature: domain Description: DDE_Tnp_1 Location: 9655-10192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3953 (pfam13129), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)