myRT

myRT report for GCA_002582385.1_ASM258238v1

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Seq: NUNA01000107.1 Bacillus cereus strain AFS037926 AFS037926_109_H8_Contig107_140523, whole genome shotgun sequence (3142 bp)
Overview 1 RT 1: 2-2740 bp Neighborhood of RT #1 [2, 2826] DDE_Tnp_1 RVT-GII RVT-GII GIIM Feature: gene Location: 2-151 bp Feature: gene Location: 307-1362 bp Feature: domain Description: DDE_Tnp_1 Location: 667-1351 bp Feature: domain Description: DDE_Tnp_1 Location: 667-1 351 bp Feature: gene Location: 1515-1901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1800-1866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 800-1 866 bp Feature: gene Location: 1993-2826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1999-2443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 999-2443 bp Feature: domain Description: GIIM Note: maturase Location: 2518-2740 bp Feature: domain Description: GIIM Note: maturase Location: 251 8-2740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)

Seq: NUNA01000062.1 Bacillus cereus strain AFS037926 AFS037926_109_H8_Contig62_140523, whole genome shotgun sequence (20476 bp)
Overview 1 RT 1: 16142-19199 bp Neighborhood of RT #1 [16142, 19231] rpsA RVT-GII Feature: gene Location: 16142-17155 bp Feature: domain Description: rpsA Location: 16439-16976 bp Feature: domain Description: rpsA Location: 16439-16976 bp Feature: gene Location: 17263-18063 bp Feature: gene Location: 18221-19231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18542-19199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18542 -19199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), RVT-GII

Seq: NUNA01000070.1 Bacillus cereus strain AFS037926 AFS037926_109_H8_Contig70_140523, whole genome shotgun sequence (21104 bp)
Overview 1 RT 1: 6296-16355 bp Neighborhood of RT #1 [6296, 16355] MhpC KOG2382 TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6296-7036 bp Feature: domain Description: MhpC Location: 6326-6740 bp Feature: domain Description: MhpC Location: 63 26-6740 bp Feature: domain Description: KOG2382 Location: 6827-7022 bp Feature: domain Description: KOG23 82 Location: 6827-7022 bp Feature: gene Location: 7169-9022 bp Feature: domain Description: TraG-D_C Location: 7181-7496 bp Feature: domain Description: TraG-D_C Location: 7181-7496 bp Feature: domain Description: Ftsk_gamma Location: 7904-8084 bp Feature: domain Description: Ftsk_gamma Location: 7904-8084 bp Feature: domain Description: Ftsk_gamma Location: 8225-8348 bp Feature: domain Description: Ftsk_gamma Location: 8225-83 48 bp Feature: gene Location: 9255-11129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9555-10260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9555-10260 bp Feature: domain Description: GIIM Note: maturase Location: 10347-10542 bp Feature: domain Description: GIIM Note: maturase Location: 103 47-10542 bp Feature: gene Location: 11802-12005 bp Feature: gene Location: 12109-13848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12379-13126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123 79-13 126 bp Feature: domain Description: Intron_maturas2 Location: 13207-13498 bp Feature: domain Description: Intron_maturas2 Location: 13 207-13 498 bp Feature: domain Description: HNHc Note: nucleases Location: 13645-13822 bp Feature: domain Description: HNHc Note: nucleases Location: 13 645-13 822 bp Feature: gene Location: 14440-15951 bp Feature: gene Location: 15969-16355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), KOG2382 (KOG2382, Predicted alpha/beta hydrolase ), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)