myRT

myRT report for GCA_002583105.1_ASM258310v1

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Seq: NUOL01000014.1 Bacillus thuringiensis strain AFS032723 AFS032723_110_G11_Contig14_140523, whole genome shotgun sequence (77162 bp)
Overview 1 RT 1: 38459-45309 bp Neighborhood of RT #1 [38459, 45309] RVT_N RVT-GII GIIM HNHc DEXDc Feature: gene Location: 38459-39172 bp Feature: gene Location: 39189-39896 bp Feature: gene Location: 40013-41821 bp Feature: domain Description: RVT_N Location: 40064-40304 bp Feature: domain Description: RVT_N Location: 40064-40304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40364-41018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40364-41 01 8 bp Feature: domain Description: GIIM Note: maturase Location: 41081-41315 bp Feature: domain Description: GIIM Note: maturase Location: 41 081 -41 31 5 bp Feature: domain Description: HNHc Note: nucleases Location: 41528-41675 bp Feature: domain Description: HNHc Note: nucleases Location: 41 528-41 675 bp Feature: gene Location: 42425-45058 bp Feature: domain Description: DEXDc Location: 43253-44204 bp Feature: domain Description: DEXDc Location: 43253-44204 bp Feature: gene Location: 45082-45309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DEXDc (smart00487)

Seq: NUOL01000027.1 Bacillus thuringiensis strain AFS032723 AFS032723_110_G11_Contig27_140523, whole genome shotgun sequence (50035 bp)
Overview 1 RT 1: 35588-38592 bp 2 RT 2: 45961-49271 bp Neighborhood of RT #1 [35588, 38612] DDE_Tnp_1 RVT-GII PRK06760 Neighborhood of RT #2 [45961, 49300] PRK13922 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 35588-35803 bp Feature: domain Description: DDE_Tnp_1 Location: 35612-35795 bp Feature: domain Description: DDE_Tnp_1 Location: 35612 -35795 bp Feature: gene Location: 35862-36119 bp Feature: gene Location: 36623-37045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36626-36971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3662 6-36971 bp Feature: gene Location: 37958-38122 bp Feature: gene Location: 38139-38612 bp Feature: domain Description: PRK06760 Location: 38142-38592 bp Feature: domain Description: PRK06760 Location: 38142 -38592 bp Feature: gene Location: 45961-46110 bp Feature: gene Location: 46541-47305 bp Feature: domain Description: PRK13922 Location: 46637-47300 bp Feature: domain Description: PRK1392 2 Location: 46637-47300 bp Feature: gene Location: 47591-49300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47753-48575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47753-48575 bp Feature: domain Description: Intron_maturas2 Location: 48656-48950 bp Feature: domain Description: Intron_maturas2 Location: 48656-48950 bp Feature: domain Description: HNHc Note: nucleases Location: 49097-49271 bp Feature: domain Description: HNHc Note: nucleases Location: 49097-492 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, PRK06760 (hypothetical protein; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUOL01000029.1 Bacillus thuringiensis strain AFS032723 AFS032723_110_G11_Contig29_140523, whole genome shotgun sequence (77098 bp)
Overview 1 RT 1: 8946-14430 bp Neighborhood of RT #1 [8946, 14430] CwlT_like RVT-GII HNHc CwlT_like NlpD Spr Feature: gene Location: 8946-10100 bp Feature: domain Description: CwlT_like Location: 9798-10083 bp Feature: domain Description: CwlT_like Location: 9798-10083 bp Feature: gene Location: 10343-10561 bp Feature: gene Location: 10873-12669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11131-11836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1113 1-1183 6 bp Feature: domain Description: HNHc Note: nucleases Location: 12397-12532 bp Feature: domain Description: HNHc Note: nucleases Location: 123 97-1253 2 bp Feature: gene Location: 12738-13838 bp Feature: domain Description: CwlT_like Location: 12765-12951 bp Feature: domain Description: CwlT_like Location: 12765-12951 bp Feature: domain Description: NlpD Location: 12978-13410 bp Feature: domain Description: NlpD Location: 12978-13 410 bp Feature: domain Description: Spr Location: 13443-13779 bp Feature: domain Description: Spr Location: 13 443 -13 779 bp Feature: gene Location: 13855-14430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507), NlpD (COG0739), Spr (COG0791)

Seq: NUOL01000048.1 Bacillus thuringiensis strain AFS032723 AFS032723_110_G11_Contig48_140523, whole genome shotgun sequence (7363 bp)
Overview 1 RT 1: 3197-7288 bp Neighborhood of RT #1 [3197, 7305] Lysozyme_like Spr RVT-GII HNHc RVT-GII CwlT_like Feature: gene Location: 3197-3469 bp Feature: gene Location: 3499-4173 bp Feature: domain Description: Lysozyme_like Location: 3535-3727 bp Feature: domain Description: Lysozyme_like Location: 3535-3727 bp Feature: domain Description: Spr Location: 3775-4150 bp Feature: domain Description: Spr Location: 3775-4 150 bp Feature: gene Location: 4249-5451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4252-4633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 252-4 633 bp Feature: domain Description: HNHc Note: nucleases Location: 5197-5329 bp Feature: domain Description: HNHc Note: nucleases Location: 5197-5329 bp Feature: gene Location: 5445-6017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5691-5994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5691-5994 bp Feature: gene Location: 6802-7305 bp Feature: domain Description: CwlT_like Location: 7006-7288 bp Feature: domain Description: CwlT_like Location: 7006-7288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lysozyme_like (pfam13702), Spr (COG0791), RVT-GII, HNHc (smart00507), CwlT_like