myRT

myRT report for GCA_002584695.1_ASM258469v1

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Seq: NUPA01000031.1 Bacillus cereus strain AFS031232 AFS031232_100_B6_Contig31_140514, whole genome shotgun sequence (104079 bp)
Overview 1 RT 1: 44177-50997 bp 2 RT 2: 66124-71490 bp Neighborhood of RT #1 [44177, 50997] T_den_put_tspse DUF3854 RVT-GII HNHc Neighborhood of RT #2 [66124, 72110] RVT-GII KOG4768 TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 44177-45076 bp Feature: domain Description: T_den_put_tspse Location: 44219-45056 bp Feature: domain Description: T_den_put_tspse Location: 4421 9-45056 bp Feature: gene Location: 45188-46111 bp Feature: domain Description: DUF3854 Location: 45740-46082 bp Feature: domain Description: DUF3854 Location: 45740-46082 bp Feature: gene Location: 46190-48073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46511-47249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651 1 -47249 bp Feature: domain Description: HNHc Note: nucleases Location: 47807-47954 bp Feature: domain Description: HNHc Note: nucleases Location: 47807-47954 bp Feature: gene Location: 48863-49339 bp Feature: gene Location: 50719-50997 bp Feature: gene Location: 66124-67635 bp Feature: gene Location: 67886-68122 bp Feature: gene Location: 68227-69387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68497-69322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68497-69322 bp Feature: gene Location: 69608-70033 bp Feature: domain Description: KOG4768 Location: 69614-70028 bp Feature: domain Description: KOG4768 Location: 6961 4-70028 bp Feature: gene Location: 70137-72110 bp Feature: domain Description: TraG-D_C Location: 70278-70638 bp Feature: domain Description: TraG-D_C Location: 70278-70638 bp Feature: domain Description: Ftsk_gamma Location: 71046-71223 bp Feature: domain Description: Ftsk_gamma Location: 71 046-71 223 bp Feature: domain Description: Ftsk_gamma Location: 71355-71490 bp Feature: domain Description: Ftsk_gamma Location: 71 355-71 490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), DUF3854 (pfam12965), RVT-GII, HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: NUPA01000080.1 Bacillus cereus strain AFS031232 AFS031232_100_B6_Contig43_140514, whole genome shotgun sequence (113773 bp)
Overview 1 RT 1: 89120-95694 bp Neighborhood of RT #1 [89120, 95694] COG4127 COG4127 RVT-Retrons AAA_15 Feature: gene Location: 89120-89608 bp Feature: domain Description: COG4127 Location: 89126-89600 bp Feature: domain Description: COG412 7 Location: 8912 6-89600 bp Feature: gene Location: 89664-89879 bp Feature: domain Description: COG4127 Location: 89673-89850 bp Feature: domain Description: COG412 7 Location: 89673-89850 bp Feature: gene Location: 90520-91560 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90646-91213 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 90646-912 13 bp Feature: gene Location: 91731-93737 bp Feature: domain Description: AAA_15 Location: 91734-92688 bp Feature: domain Description: AAA_15 Location: 91734-92 688 bp Feature: gene Location: 94072-95694 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4127 (Predicted restriction endonuclease, Mrr-cat superfamily ), RVT-Retrons, AAA_15 (pfam13175)

Seq: NUPA01000084.1 Bacillus cereus strain AFS031232 AFS031232_100_B6_Contig47_140514, whole genome shotgun sequence (43001 bp)
Overview 1 RT 1: 10460-14407 bp Neighborhood of RT #1 [10460, 14424] RVT-GII HNHc PRK03113 HTH_ARSR Feature: gene Location: 10460-10663 bp Feature: gene Location: 10737-10928 bp Feature: gene Location: 11728-13380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11773-12484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11773 -12484 bp Feature: domain Description: HNHc Note: nucleases Location: 13075-13225 bp Feature: domain Description: HNHc Note: nucleases Location: 13 075-13 225 bp Feature: gene Location: 13620-14057 bp Feature: domain Description: PRK03113 Location: 13635-14010 bp Feature: domain Description: PRK03 113 Location: 13 63 5-14010 bp Feature: gene Location: 14131-14424 bp Feature: domain Description: HTH_ARSR Location: 14194-14407 bp Feature: domain Description: HTH_ARSR Location: 14194-14407 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK03113 (putative disulfide oxidoreductase; Provisional), HTH_ARSR (smart00418)