myRT

myRT report for GCA_002585495.1_ASM258549v1

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Seq: NUNP01000030.1 Bacillus cereus strain AFS035470 AFS035470_104_F1_Contig30_140523, whole genome shotgun sequence (37196 bp)
Overview 1 RT 1: 16074-26221 bp Neighborhood of RT #1 [16074, 26400] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 16074-16544 bp Feature: gene Location: 16562-17866 bp Feature: gene Location: 18500-20338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18845-19541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8845-1 9541 bp Feature: domain Description: HNHc Note: nucleases Location: 20093-20225 bp Feature: domain Description: HNHc Note: nucleases Location: 20093-20225 bp Feature: gene Location: 20404-20673 bp Feature: gene Location: 21259-23076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21529-22354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 529-22354 bp Feature: domain Description: Intron_maturas2 Location: 22435-22726 bp Feature: domain Description: Intron_maturas2 Location: 22435-22726 bp Feature: domain Description: HNHc Note: nucleases Location: 22873-23050 bp Feature: domain Description: HNHc Note: nucleases Location: 22873-23050 bp Feature: gene Location: 23270-25225 bp Feature: domain Description: TraG-D_C Location: 23321-23681 bp Feature: domain Description: TraG-D_C Location: 23321 -23681 bp Feature: domain Description: Ftsk_gamma Location: 24089-24269 bp Feature: domain Description: Ftsk_gamma Location: 24089-24269 bp Feature: domain Description: Ftsk_gamma Location: 24422-24557 bp Feature: domain Description: Ftsk_gamma Location: 24422-24557 bp Feature: gene Location: 25414-26400 bp Feature: domain Description: rpsA Location: 25684-26221 bp Feature: domain Description: rpsA Location: 25684-26221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: NUNP01000011.1 Bacillus cereus strain AFS035470 AFS035470_104_F1_Contig7_140523, whole genome shotgun sequence (407162 bp)
Overview 1 RT 1: 131334-138462 bp Neighborhood of RT #1 [131334, 138476] RimP polC RVT-GII HNHc polC Feature: gene Location: 131334-131804 bp Feature: domain Description: RimP Location: 131340-131802 bp Feature: domain Description: RimP Location: 131340-131802 bp Feature: gene Location: 132138-133577 bp Feature: domain Description: polC Location: 132171-133575 bp Feature: domain Description: polC Location: 132 171-133575 bp Feature: gene Location: 133651-134847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133957-134242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133957-1342 42 bp Feature: domain Description: HNHc Note: nucleases Location: 134578-134728 bp Feature: domain Description: HNHc Note: nucleases Location: 134578-13472 8 bp Feature: gene Location: 135012-135275 bp Feature: gene Location: 135564-138476 bp Feature: domain Description: polC Location: 135582-138462 bp Feature: domain Description: polC Location: 135582 -138462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimP (COG0779), polC (TIGR00354), RVT-GII, HNHc (smart00507)

Seq: NUNP01000054.1 Bacillus cereus strain AFS035470 AFS035470_104_F1_Contig87_140523, whole genome shotgun sequence (7296 bp)
Overview 1 RT 1: 1604-6913 bp Neighborhood of RT #1 [1604, 6975] TraG-D_C RVT-GII Intron_maturas2 HNHc TraG_VirD4 VirD4 Feature: gene Location: 1604-1813 bp Feature: gene Location: 1871-2839 bp Feature: domain Description: TraG-D_C Location: 1880-2192 bp Feature: domain Description: TraG-D_C Location: 1880-2192 bp Feature: gene Location: 2947-4761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3211-4039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 211-403 9 bp Feature: domain Description: Intron_maturas2 Location: 4117-4432 bp Feature: domain Description: Intron_maturas2 Location: 4117-443 2 bp Feature: domain Description: HNHc Note: nucleases Location: 4558-4735 bp Feature: domain Description: HNHc Note: nucleases Location: 4558-473 5 bp Feature: gene Location: 4767-4940 bp Feature: gene Location: 5311-6975 bp Feature: domain Description: TraG_VirD4 Location: 5785-6487 bp Feature: domain Description: TraG_VirD4 Location: 5785-6487 bp Feature: domain Description: VirD4 Location: 6754-6913 bp Feature: domain Description: VirD4 Location: 6754-6913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG_VirD4, VirD4 (COG3505)