myRT

myRT report for GCA_002588535.1_ASM258853v1

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Seq: PDKY01000002.1 Pluralibacter gergoviae strain FDAARGOS_386 pCNH_820.contig.1, whole genome shotgun sequence (5227020 bp)
Overview 1 RT 1: 679136-683867 bp Neighborhood of RT #1 [679136, 683905] InsE Tra5 RVT-GII GIIM PHA02517 FimC Feature: gene Location: 679136-679354 bp Feature: domain Description: InsE Location: 679163-679334 bp Feature: domain Description: InsE Location: 6791 63-679334 bp Feature: gene Location: 679431-679910 bp Feature: domain Description: Tra5 Location: 679554-679845 bp Feature: domain Description: Tra5 Location: 679554-679845 bp Feature: gene Location: 680502-682025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680775-681507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680775-681 507 bp Feature: domain Description: GIIM Note: maturase Location: 681588-681780 bp Feature: domain Description: GIIM Note: maturase Location: 681 588-681 780 bp Feature: gene Location: 682148-682567 bp Feature: domain Description: PHA02517 Location: 682151-682559 bp Feature: domain Description: PHA0251 7 Location: 6821 51 -682559 bp Feature: gene Location: 683171-683905 bp Feature: domain Description: FimC Location: 683186-683867 bp Feature: domain Description: FimC Location: 6831 86-683867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), FimC (COG3121)

Seq: PDKY01000003.1 Pluralibacter gergoviae strain FDAARGOS_386 pCNH_820.contig.2, whole genome shotgun sequence (178152 bp)
Overview 1 RT 1: 135121-138969 bp Neighborhood of RT #1 [135121, 138969] HHA RVT-GII INT_Cre_C Feature: gene Location: 135121-135375 bp Feature: domain Description: HHA Location: 135172-135355 bp Feature: domain Description: HHA Location: 135172 -135355 bp Feature: gene Location: 135667-135879 bp Feature: gene Location: 135954-137243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136281-136815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362 81-136815 bp Feature: gene Location: 137450-138586 bp Feature: domain Description: INT_Cre_C Location: 137873-138527 bp Feature: domain Description: INT_Cre_C Location: 137873-13852 7 bp Feature: gene Location: 138652-138969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)