myRT

myRT report for GCA_002589015.1_ASM258901v1

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Seq: NUUL01000106.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig106_140514, whole genome shotgun sequence (781 bp)
Overview 1 RT 1: 1-583 bp Neighborhood of RT #1 [1, 780] RVT-GII GIIM Feature: gene Location: 1-780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-301 bp Feature: domain Description: GIIM Note: maturase Location: 415-583 bp Feature: domain Description: GIIM Note: maturase Location: 41 5-583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NUUL01000108.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig108_140514, whole genome shotgun sequence (23319 bp)
Overview 1 RT 1: 740-4015 bp Neighborhood of RT #1 [740, 4015] RVT-GII HNHc Lysozyme_like Spr Feature: gene Location: 740-2509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 998-1694 bp Feature: domain Description: HNHc Note: nucleases Location: 2255-2393 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 55-2 393 bp Feature: gene Location: 2625-3383 bp Feature: domain Description: Lysozyme_like Location: 2628-2964 bp Feature: domain Description: Lysozyme_like Location: 2 62 8-2 964 bp Feature: domain Description: Spr Location: 2979-3366 bp Feature: domain Description: Spr Location: 2 979-3366 bp Feature: gene Location: 3407-4015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Lysozyme_like (pfam13702), Spr (COG0791)

Seq: NUUL01000109.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig109_140514, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 94-2420 bp Neighborhood of RT #1 [94, 2420] RVT-GII HNHc Feature: gene Location: 94-1890 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352-1057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 52-1057 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1618-1753 bp Feature: gene Location: 2202-2420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUUL01000010.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig10_140514, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 390-2190 bp Neighborhood of RT #1 [390, 2213] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 390-2213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654 -14 88 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Feature: domain Description: HNHc Note: nucleases Location: 2034 -2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUUL01000013.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig13_140514, whole genome shotgun sequence (65920 bp)
Overview 1 RT 1: 34777-42006 bp Neighborhood of RT #1 [34777, 42006] RVT-GII GIIM KOG1000 KOG1000 Feature: gene Location: 34777-35004 bp Feature: gene Location: 35076-35984 bp Feature: gene Location: 36731-38596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37031-37736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37031-37736 bp Feature: domain Description: GIIM Note: maturase Location: 37823-38006 bp Feature: domain Description: GIIM Note: maturase Location: 37823-38006 bp Feature: gene Location: 38874-41276 bp Feature: domain Description: KOG1000 Location: 39582-39798 bp Feature: domain Description: KOG1000 Location: 395 82-39798 bp Feature: domain Description: KOG1000 Location: 40401-40734 bp Feature: domain Description: KOG1000 Location: 40401-40734 bp Feature: gene Location: 41293-42006 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: NUUL01000123.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig144_140514, whole genome shotgun sequence (2002 bp)
Overview 1 RT 1: 167-1744 bp Neighborhood of RT #1 [167, 1827] RVT-GII GIIM Feature: gene Location: 167-346 bp Feature: gene Location: 496-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1444 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Feature: domain Description: GIIM Note: maturase Location: 1519-1744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NUUL01000131.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig152_140514, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 159-2311 bp Neighborhood of RT #1 [159, 2311] RVT-GII HNHc Feature: gene Location: 159-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453-1149 bp Feature: domain Description: HNHc Note: nucleases Location: 1749-1824 bp Feature: domain Description: HNHc Note: nucleases Location: 17 49-1824 bp Feature: gene Location: 2129-2311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUUL01000138.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig159_140514, whole genome shotgun sequence (2567 bp)
Overview 1 RT 1: 132-1926 bp Neighborhood of RT #1 [132, 1955] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 132-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1230 bp Feature: domain Description: Intron_maturas2 Location: 1302-1620 bp Feature: domain Description: Intron_maturas2 Location: 1302-1620 bp Feature: domain Description: HNHc Note: nucleases Location: 1773-1926 bp Feature: domain Description: HNHc Note: nucleases Location: 1773-1926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUUL01000236.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig236_140514, whole genome shotgun sequence (7567 bp)
Overview 1 RT 1: 2-7501 bp Neighborhood of RT #1 [2, 7521] AE_Prim_S_like RVT-UG10 PRK13922 Feature: gene Location: 2-520 bp Feature: gene Location: 530-955 bp Feature: gene Location: 1394-7033 bp Feature: domain Description: AE_Prim_S_like Location: 1604-1823 bp Feature: domain Description: AE_Prim_S_like Location: 1604-1823 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2810-3464 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2810-3464 bp Feature: gene Location: 7309-7521 bp Feature: domain Description: PRK13922 Location: 7381-7501 bp Feature: domain Description: PRK139 22 Location: 7381-7501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional)

Seq: NUUL01000270.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig270_140514, whole genome shotgun sequence (1254 bp)
Overview 1 RT 1: 665-1250 bp Neighborhood of RT #1 [665, 1252] RVT-GII Feature: gene Location: 665-1252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 965-1250 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NUUL01000289.1 Bacillus thuringiensis strain AFS031473 AFS031473_101_E12_Contig289_140514, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 107-1772 bp Neighborhood of RT #1 [107, 1897] RVT-GII HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-11 00 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)