myRT

myRT report for GCA_002589045.1_ASM258904v1

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Seq: NUTX01000141.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig105_140618, whole genome shotgun sequence (2660 bp)
Overview 1 RT 1: 235-1982 bp Neighborhood of RT #1 [235, 1996] RVT-GII GIIM HNHc RVT-GII Feature: gene Location: 235-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 298-508 bp Feature: domain Description: GIIM Note: maturase Location: 622-790 bp Feature: domain Description: GIIM Note: maturase Location: 622-790 bp Feature: domain Description: HNHc Note: nucleases Location: 1138-1303 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 38-1 303 bp Feature: gene Location: 1388-1996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1688-1982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 688-1 982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NUTX01000103.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig133_140618, whole genome shotgun sequence (1106 bp)
Overview 1 RT 1: 3-960 bp Neighborhood of RT #1 [3, 1043] RVT-GII GIIM Feature: gene Location: 3-1043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21-660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1-660 bp Feature: domain Description: GIIM Note: maturase Location: 735-960 bp Feature: domain Description: GIIM Note: maturase Location: 735-960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NUTX01000387.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig179_140618, whole genome shotgun sequence (2329 bp)
Overview 1 RT 1: 390-2190 bp Neighborhood of RT #1 [390, 2213] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 390-2213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-1488 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: Intron_maturas2 Location: 1557-1896 bp Feature: domain Description: HNHc Note: nucleases Location: 2034-2190 bp Feature: domain Description: HNHc Note: nucleases Location: 203 4-2190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: NUTX01000403.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig195_140618, whole genome shotgun sequence (2680 bp)
Overview 1 RT 1: 261-2450 bp Neighborhood of RT #1 [261, 2587] RVT-GII HNHc Feature: gene Location: 261-479 bp Feature: gene Location: 791-2587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104 9-1754 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-24 50 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUTX01000404.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig196_140618, whole genome shotgun sequence (2613 bp)
Overview 1 RT 1: 100-1753 bp Neighborhood of RT #1 [100, 1869] RVT-GII HNHc Feature: gene Location: 100-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 358-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 8-105 4 bp Feature: domain Description: HNHc Note: nucleases Location: 1615-1753 bp Feature: domain Description: HNHc Note: nucleases Location: 1615 -175 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: NUTX01000339.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig226_140618, whole genome shotgun sequence (5177 bp)
Overview 1 RT 1: 107-4536 bp Neighborhood of RT #1 [107, 4565] RVT-GII HNHc RVT-GII Intron_maturas2 HNHc Feature: gene Location: 107-1897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1100 bp Feature: domain Description: HNHc Note: nucleases Location: 1640-1772 bp Feature: domain Description: HNHc Note: nucleases Location: 16 40-1772 bp Feature: gene Location: 2742-4565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3012-3840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3012-3840 bp Feature: domain Description: Intron_maturas2 Location: 3912-4230 bp Feature: domain Description: Intron_maturas2 Location: 3912-4230 bp Feature: domain Description: HNHc Note: nucleases Location: 4383-4536 bp Feature: domain Description: HNHc Note: nucleases Location: 4383-4536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: NUTX01000038.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig51_140618, whole genome shotgun sequence (55643 bp)
Overview 1 RT 1: 24036-31265 bp Neighborhood of RT #1 [24036, 31265] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 24036-24749 bp Feature: gene Location: 24766-27168 bp Feature: domain Description: KOG1000 Location: 25474-25690 bp Feature: domain Description: KOG1000 Location: 2547 4-25690 bp Feature: domain Description: KOG1000 Location: 26293-26626 bp Feature: domain Description: KOG1000 Location: 26293-26626 bp Feature: gene Location: 27446-29311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27746-28451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 7 46-28451 bp Feature: domain Description: GIIM Note: maturase Location: 28538-28721 bp Feature: domain Description: GIIM Note: maturase Location: 28538-287 21 bp Feature: gene Location: 30058-30966 bp Feature: gene Location: 31038-31265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, GIIM (pfam08388)

Seq: NUTX01000061.1 Bacillus thuringiensis strain AFS034084 AFS034084_114_G5_Contig62_140618, whole genome shotgun sequence (13855 bp)
Overview 1 RT 1: 2-9049 bp Neighborhood of RT #1 [2, 9090] AE_Prim_S_like RVT-UG10 PRK13922 RapH_N TPR TPR Feature: gene Location: 2-520 bp Feature: gene Location: 530-955 bp Feature: gene Location: 1394-7033 bp Feature: domain Description: AE_Prim_S_like Location: 1604-1823 bp Feature: domain Description: AE_Prim_S_like Location: 1604-18 23 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 2810-3464 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 28 10-3464 bp Feature: gene Location: 7309-7536 bp Feature: domain Description: PRK13922 Location: 7396-7516 bp Feature: domain Description: PRK13922 Location: 7396-7516 bp Feature: gene Location: 7999-9090 bp Feature: domain Description: RapH_N Location: 8020-8191 bp Feature: domain Description: RapH_N Location: 8 020-8 191 bp Feature: domain Description: TPR Location: 8326-8593 bp Feature: domain Description: TPR Location: 8 326-8 593 bp Feature: domain Description: TPR Location: 8638-9049 bp Feature: domain Description: TPR Location: 8 638 -9049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AE_Prim_S_like (cl01287), RVT-UG10, PRK13922 (rod shape-determining protein MreC; Provisional), RapH_N (pfam18801), TPR (smart00028)