myRT

myRT report for GCA_002589375.1_ASM258937v1

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Seq: NUUO01000132.1 Bacillus toyonensis strain AFS030602 AFS030602_64_H12_Contig132_140404, whole genome shotgun sequence (7049 bp)
Overview 1 RT 1: 2341-6022 bp Neighborhood of RT #1 [2341, 6022] RVT_N RVT-GII Feature: gene Location: 2341-3363 bp Feature: gene Location: 3413-3583 bp Feature: gene Location: 4383-4760 bp Feature: RT Description: RVT_N Location: 4389-4476 bp Feature: RT Description: RVT_N Location: 4389-4476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4530-4746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4530-4746 bp Feature: gene Location: 5259-5417 bp Feature: gene Location: 5894-6022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: NUUO01000032.1 Bacillus toyonensis strain AFS030602 AFS030602_64_H12_Contig32_140404, whole genome shotgun sequence (34660 bp)
Overview 1 RT 1: 21878-34439 bp Neighborhood of RT #1 [21878, 34439] PinE RVT-GII GIIM HNHc PRK12467 SDR_e1 Feature: gene Location: 21878-22177 bp Feature: gene Location: 22218-22790 bp Feature: domain Description: PinE Location: 22224-22746 bp Feature: domain Description: PinE Location: 2 2 2 2 4-2 2 746 bp Feature: gene Location: 22908-24758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23217-23952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 17-2 3952 bp Feature: domain Description: GIIM Note: maturase Location: 24021-24201 bp Feature: domain Description: GIIM Note: maturase Location: 2 402 1-2 42 01 bp Feature: domain Description: HNHc Note: nucleases Location: 24474-24642 bp Feature: domain Description: HNHc Note: nucleases Location: 2 4474-2 4642 bp Feature: gene Location: 25926-33551 bp Feature: domain Description: PRK12467 Location: 25974-32307 bp Feature: domain Description: PRK12 467 Location: 2 5974-32 307 bp Feature: domain Description: SDR_e1 Location: 32418-33276 bp Feature: domain Description: SDR_e1 Location: 32 418-332 76 bp Feature: gene Location: 34209-34439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK12467 (peptide synthase; Provisional), SDR_e1 (cd05235)

Seq: NUUO01000060.1 Bacillus toyonensis strain AFS030602 AFS030602_64_H12_Contig60_140404, whole genome shotgun sequence (33507 bp)
Overview 1 RT 1: 15055-19568 bp Neighborhood of RT #1 [15055, 19576] SdrD_B SdrD_B Big_2 Big_2 RicinB_lectin_2 PDDEXK_2 RVT-GII hlyII Feature: gene Location: 15055-16770 bp Feature: domain Description: SdrD_B Location: 15181-15421 bp Feature: domain Description: SdrD_B Location: 15181-15421 bp Feature: domain Description: SdrD_B Location: 15505-15754 bp Feature: domain Description: SdrD_B Location: 15505-15754 bp Feature: domain Description: Big_2 Location: 15826-16045 bp Feature: domain Description: Big_2 Location: 15826-16045 bp Feature: domain Description: Big_2 Location: 16087-16279 bp Feature: domain Description: Big_2 Location: 16087-16279 bp Feature: domain Description: RicinB_lectin_2 Location: 16336-16573 bp Feature: domain Description: RicinB_lectin_2 Location: 163 3 6-16573 bp Feature: gene Location: 17482-17649 bp Feature: domain Description: PDDEXK_2 Location: 17488-17647 bp Feature: domain Description: PDDEXK_2 Location: 17488-17647 bp Feature: gene Location: 17884-18072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17941-18061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17941-18061 bp Feature: gene Location: 18155-18343 bp Feature: gene Location: 18614-19576 bp Feature: domain Description: hlyII Location: 18695-19568 bp Feature: domain Description: hlyII Location: 18695-19568 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SdrD_B (pfam17210), Big_2 (pfam02368), RicinB_lectin_2 (pfam14200), PDDEXK_2 (pfam12784), RVT-GII, hlyII (TIGR01002)

Seq: NUUO01000063.1 Bacillus toyonensis strain AFS030602 AFS030602_64_H12_Contig63_140404, whole genome shotgun sequence (40677 bp)
Overview 1 RT 1: 20215-26312 bp Neighborhood of RT #1 [20215, 26407] Spr RVT-GII Intron_maturas2 HNHc Lysozyme_like VirB4 TraC-F-type Feature: gene Location: 20215-20793 bp Feature: gene Location: 20821-21297 bp Feature: domain Description: Spr Location: 20899-21274 bp Feature: domain Description: Spr Location: 20899-21274 bp Feature: gene Location: 21409-23232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21673-22507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21673-22507 bp Feature: domain Description: Intron_maturas2 Location: 22579-22897 bp Feature: domain Description: Intron_maturas2 Location: 22579-22897 bp Feature: domain Description: HNHc Note: nucleases Location: 23053-23206 bp Feature: domain Description: HNHc Note: nucleases Location: 23053-23206 bp Feature: gene Location: 23803-24465 bp Feature: domain Description: Lysozyme_like Location: 23992-24454 bp Feature: domain Description: Lysozyme_like Location: 23992-24 4 54 bp Feature: gene Location: 24470-26407 bp Feature: domain Description: VirB4 Location: 24614-24974 bp Feature: domain Description: VirB4 Location: 24 614 -24 974 bp Feature: domain Description: TraC-F-type Location: 25187-26312 bp Feature: domain Description: TraC-F-type Location: 25187-26312 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Lysozyme_like (pfam13702), VirB4 (COG3451), TraC-F-type (TIGR02746)

Seq: NUUO01000087.1 Bacillus toyonensis strain AFS030602 AFS030602_64_H12_Contig87_140404, whole genome shotgun sequence (16493 bp)
Overview 1 RT 1: 7402-12203 bp Neighborhood of RT #1 [7402, 12205] RVT-GII GIIM HipB HipB AbrB Feature: gene Location: 7402-7551 bp Feature: gene Location: 8041-8316 bp Feature: gene Location: 8783-10021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8948-9563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8948-95 63 bp Feature: domain Description: GIIM Note: maturase Location: 9623-9830 bp Feature: domain Description: GIIM Note: maturase Location: 9623-9830 bp Feature: gene Location: 10377-11177 bp Feature: domain Description: HipB Location: 10389-10557 bp Feature: domain Description: HipB Location: 10389-105 5 7 bp Feature: domain Description: HipB Location: 10596-10869 bp Feature: domain Description: HipB Location: 105 96-10869 bp Feature: gene Location: 12020-12205 bp Feature: domain Description: AbrB Location: 12080-12203 bp Feature: domain Description: AbrB Location: 12080-12203 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), AbrB (pfam05145), RVT-GII, GIIM (pfam08388)

Seq: NUUO01000098.1 Bacillus toyonensis strain AFS030602 AFS030602_64_H12_Contig98_140404, whole genome shotgun sequence (2552 bp)
Overview 1 RT 1: 627-2418 bp Neighborhood of RT #1 [627, 2447] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 627-2447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 891-1719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 891-1719 bp Feature: domain Description: Intron_maturas2 Location: 1857-2091 bp Feature: domain Description: Intron_maturas2 Location: 1857-2091 bp Feature: domain Description: HNHc Note: nucleases Location: 2271-2418 bp Feature: domain Description: HNHc Note: nucleases Location: 2271-2418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)