myRT

myRT report for GCA_002631085.2_ASM263108v2

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Seq: PDNH02000003.1 Photobacterium leiognathi strain JS01 tig00000003, whole genome shotgun sequence (3251164 bp)
Overview 1 RT 1: 1237855-1241547 bp 2 RT 2: 1616059-1619714 bp Neighborhood of RT #1 [1237855, 1241552] Phage_int_SAM_3 INT_P4_C RVT_N RVT-GII YncA Neighborhood of RT #2 [1616059, 1619731] RVT-UG8 RVT-UG3 SLATT_5 Feature: gene Location: 1237855-1238070 bp Feature: domain Description: Phage_int_SAM_3 Location: 1237861-1238017 bp Feature: domain Description: Phage_int_SAM_3 Location: 1 237861 -1 23801 7 bp Feature: gene Location: 1238130-1238540 bp Feature: domain Description: INT_P4_C Location: 1238136-1238517 bp Feature: domain Description: INT_P4_C Location: 1 2381 36-1 23851 7 bp Feature: gene Location: 1239179-1240204 bp Feature: domain Description: RVT_N Location: 1239227-1239470 bp Feature: domain Description: RVT_N Location: 1 239227-1 239470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1239515-1240142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 23951 5-1 2401 42 bp Feature: gene Location: 1240217-1240474 bp Feature: gene Location: 1241037-1241552 bp Feature: domain Description: YncA Location: 1241064-1241547 bp Feature: domain Description: YncA Location: 1 241 064-1 241 547 bp Feature: gene Location: 1616059-1616343 bp Feature: gene Location: 1616447-1616587 bp Feature: gene Location: 1616939-1617451 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1616945-1617356 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 61 6945-1 61 7356 bp Feature: gene Location: 1617751-1617969 bp Feature: gene Location: 1618071-1618895 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1618116-1618563 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 61 81 1 6-1 61 8563 bp Feature: gene Location: 1618904-1619137 bp Feature: gene Location: 1619369-1619731 bp Feature: domain Description: SLATT_5 Location: 1619384-1619714 bp Feature: domain Description: SLATT_5 Location: 1 61 9384-1 61 971 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_3 (pfam14659), INT_P4_C (cd00801), RVT_N (pfam13655), RVT-GII, YncA (COG1247), RVT-UG8, RVT-UG3, SLATT_5 (pfam18160)