myRT

myRT report for GCA_002631125.1_ASM263112v1

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Seq: PDNK01000025.1 Salmonella enterica subsp. enterica serovar Typhimurium strain SE426 426_contig_25, whole genome shotgun sequence (105047 bp)
Overview 1 RT 1: 2-5656 bp Neighborhood of RT #1 [2, 5658] 5 RVT-UG11 PRK10201 PRK05658 Feature: gene Location: 2-1021 bp Feature: domain Description: 5 Location: 545-839 bp Feature: domain Description: 5 Location: 545-839 bp Feature: gene Location: 1151-1318 bp Feature: gene Location: 1958-2722 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2081-2534 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2081 -2534 bp Feature: gene Location: 3046-3552 bp Feature: domain Description: PRK10201 Location: 3049-3547 bp Feature: domain Description: PRK1 0201 Location: 3049-3547 bp Feature: gene Location: 3676-5658 bp Feature: domain Description: PRK05658 Location: 3814-5656 bp Feature: domain Description: PRK05658 Location: 381 4-5656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 5 (PHA02596), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: PDNK01000043.1 Salmonella enterica subsp. enterica serovar Typhimurium strain SE426 426_contig_43, whole genome shotgun sequence (48967 bp)
Overview 1 RT 1: 44968-48854 bp Neighborhood of RT #1 [44968, 48854] PRK10473 RVT-Retrons Feature: gene Location: 44968-46155 bp Feature: domain Description: PRK10473 Location: 44971-46147 bp Feature: domain Description: PRK10473 Location: 44971-46147 bp Feature: gene Location: 46500-46709 bp Feature: gene Location: 46957-47892 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47068-47653 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47068-47653 bp Feature: gene Location: 47892-48854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons