myRT

myRT report for GCA_002631395.1_ASM263139v1

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Seq: NXNT01000057.1 Escherichia coli strain 22c_Esco_HA-NL 127798C_contig_57, whole genome shotgun sequence (37085 bp)
Overview 1 RT 1: 27183-30205 bp Neighborhood of RT #1 [27183, 30205] RVT-GII RVT-GII GIIM Feature: gene Location: 27183-28088 bp Feature: gene Location: 28226-28417 bp Feature: gene Location: 28574-29113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28904-28982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28904-28982 bp Feature: gene Location: 29141-29662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29147-29429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 47-29429 bp Feature: domain Description: GIIM Note: maturase Location: 29477-29657 bp Feature: domain Description: GIIM Note: maturase Location: 29477-29657 bp Feature: gene Location: 29761-29907 bp Feature: gene Location: 30017-30205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NXNT01000084.1 Escherichia coli strain 22c_Esco_HA-NL 127798C_contig_84, whole genome shotgun sequence (24888 bp)
Overview 1 RT 1: 11975-18218 bp Neighborhood of RT #1 [11975, 18355] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 11975-12241 bp Feature: domain Description: Phage_integrase Location: 12041-12137 bp Feature: domain Description: Phage_integrase Location: 12 041-12 137 bp Feature: gene Location: 12324-12794 bp Feature: gene Location: 13141-16350 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13669-14158 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13669-14158 bp Feature: domain Description: nitrilase Location: 15664-16261 bp Feature: domain Description: nitrilase Location: 15664-162 61 bp Feature: gene Location: 16645-17448 bp Feature: domain Description: AbiEi_3_N Location: 16678-16939 bp Feature: domain Description: AbiEi_3_N Location: 16678-16939 bp Feature: domain Description: AbiEi_3 Location: 16951-17407 bp Feature: domain Description: AbiEi_3 Location: 16951-17407 bp Feature: gene Location: 17435-18355 bp Feature: domain Description: AbiEii Location: 17477-18218 bp Feature: domain Description: AbiEii Location: 17477-182 18 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)