myRT

myRT report for GCA_002631455.1_ASM263145v1

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Seq: NXON01000010.1 Escherichia coli strain 38_Esco_HA-DE 70239536_contig_10, whole genome shotgun sequence (74178 bp)
Overview 1 RT 1: 43993-47025 bp Neighborhood of RT #1 [43993, 47025] RVT-GII GIIM RVT-GII Feature: gene Location: 43993-44163 bp Feature: gene Location: 44301-44447 bp Feature: gene Location: 44546-45067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44552-44834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44552-44834 bp Feature: domain Description: GIIM Note: maturase Location: 44882-45062 bp Feature: domain Description: GIIM Note: maturase Location: 44882-45062 bp Feature: gene Location: 45095-45634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45425-45503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45425-45503 bp Feature: gene Location: 45665-45862 bp Feature: gene Location: 46120-47025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NXON01000005.1 Escherichia coli strain 38_Esco_HA-DE 70239536_contig_5, whole genome shotgun sequence (169569 bp)
Overview 1 RT 1: 108668-114699 bp Neighborhood of RT #1 [108668, 114699] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 108668-109588 bp Feature: domain Description: AbiEii Location: 108710-109451 bp Feature: domain Description: AbiEii Location: 108710-109451 bp Feature: gene Location: 109575-110378 bp Feature: domain Description: AbiEi_3_N Location: 109608-109869 bp Feature: domain Description: AbiEi_3_N Location: 109608-109869 bp Feature: domain Description: AbiEi_3 Location: 109881-110337 bp Feature: domain Description: AbiEi_3 Location: 109881-110337 bp Feature: gene Location: 110673-113882 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 111201-111690 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1112 01-111690 bp Feature: domain Description: nitrilase Location: 113196-113793 bp Feature: domain Description: nitrilase Location: 113196-113793 bp Feature: gene Location: 114043-114183 bp Feature: domain Description: Phage_ASH Location: 114070-114163 bp Feature: domain Description: Phage_ASH Location: 114070-114163 bp Feature: gene Location: 114229-114699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)