myRT

myRT report for GCA_002631975.1_ASM263197v1

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Seq: NTLP01000537.1 Marinobacter sp. ESRF-bin10 contig-1158000148, whole genome shotgun sequence (3741 bp)
Overview 1 RT 1: 1015-3518 bp Neighborhood of RT #1 [1015, 3739] Ion_trans_2 TrkA_N PPPi RVT-GII GIIM Feature: gene Location: 1015-2193 bp Feature: domain Description: Ion_trans_2 Location: 1123-1306 bp Feature: domain Description: Ion_trans_2 Location: 1 1 23-1 306 bp Feature: domain Description: TrkA_N Location: 1531-1789 bp Feature: domain Description: TrkA_N Location: 1 531 -1 789 bp Feature: gene Location: 2195-3052 bp Feature: domain Description: PPPi Location: 2198-2813 bp Feature: domain Description: PPPi Location: 21 98-281 3 bp Feature: gene Location: 3107-3739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3113-3236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 3-3236 bp Feature: domain Description: GIIM Note: maturase Location: 3293-3518 bp Feature: domain Description: GIIM Note: maturase Location: 3293-351 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ion_trans_2 (pfam07885), TrkA_N (pfam02254), PPPi (COG3025), RVT-GII, GIIM (pfam08388)

Seq: NTLP01000318.1 Marinobacter sp. ESRF-bin10 contig-817000334, whole genome shotgun sequence (10720 bp)
Overview 1 RT 1: 6635-10719 bp Neighborhood of RT #1 [6635, 10719] fliF fliE RVT-GII GIIM Feature: gene Location: 6635-8332 bp Feature: domain Description: fliF Location: 6710-8327 bp Feature: domain Description: fliF Location: 6710-832 7 bp Feature: gene Location: 8348-8716 bp Feature: domain Description: fliE Location: 8354-8714 bp Feature: domain Description: fliE Location: 8354-8714 bp Feature: gene Location: 8972-10333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9299-9911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 99-9911 bp Feature: domain Description: GIIM Note: maturase Location: 9971-10175 bp Feature: domain Description: GIIM Note: maturase Location: 9971-10175 bp Feature: gene Location: 10513-10719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fliF (TIGR00206), fliE (TIGR00205), RVT-GII, GIIM (pfam08388)

Seq: NTLP01000496.1 Marinobacter sp. ESRF-bin10 contig-827000093, whole genome shotgun sequence (7816 bp)
Overview 1 RT 1: 207-3324 bp Neighborhood of RT #1 [207, 3353] RVT-GII GIIM TnpB_IS66 LZ_Tnp_IS66 DDE_Tnp_IS66 Feature: gene Location: 207-533 bp Feature: gene Location: 574-1965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898-1516 bp Feature: domain Description: GIIM Note: maturase Location: 1570-1798 bp Feature: domain Description: GIIM Note: maturase Location: 1570-1798 bp Feature: gene Location: 2112-2480 bp Feature: domain Description: TnpB_IS66 Location: 2154-2436 bp Feature: domain Description: TnpB_IS66 Location: 2154-243 6 bp Feature: gene Location: 2526-3353 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2676-2892 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2676-2892 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3084-3324 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3 084-3 3 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)