myRT

myRT report for GCA_002632385.1_ASM263238v1

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Seq: NSJN01000041.1 Candidatus Methylomirabilis oxyfera isolate Ru_enrich_MO1 NODE_1793_length_11128_cov_84.4129, whole genome shotgun sequence (11128 bp)
Overview 1 RT 1: 2912-6422 bp Neighborhood of RT #1 [2912, 6442] Cas1_I-II-III 23S_rRNA_IVP_like RVT-CRISPR PhdYeFM_antitox COG1569 Feature: gene Location: 2912-3925 bp Feature: domain Description: Cas1_I-II-III Location: 2921-3881 bp Feature: domain Description: Cas1 _I-II-III Location: 2921 -3881 bp Feature: gene Location: 4081-4476 bp Feature: domain Description: 23S_rRNA_IVP_like Location: 4111-4432 bp Feature: domain Description: 23S_rRNA_IVP_like Location: 41 1 1 -4432 bp Feature: gene Location: 4528-5448 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4729-5332 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4729-5332 bp Feature: gene Location: 5719-6015 bp Feature: domain Description: PhdYeFM_antitox Location: 5734-5875 bp Feature: domain Description: PhdYeFM_antitox Location: 5734-5875 bp Feature: gene Location: 6008-6442 bp Feature: domain Description: COG1569 Location: 6017-6422 bp Feature: domain Description: COG1 569 Location: 601 7-6422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), 23S_rRNA_IVP_like (cd16377), RVT-CRISPR, PhdYeFM_antitox (pfam02604), COG1569 (Predicted nucleic acid-binding protein, contains PIN domain )

Seq: NSJN01000001.1 Candidatus Methylomirabilis oxyfera isolate Ru_enrich_MO1 NODE_24_length_193950_cov_101.106, whole genome shotgun sequence (193950 bp)
Overview 1 RT 1: 103977-112442 bp Neighborhood of RT #1 [103977, 112498] TadA COG1373 YkfC RVT-UG19 COG0610 RMtype1_S_LdeBORF1052P-TRD2-CR2 RMtype1_S_LdeBORF1052P-TRD2-CR2 Feature: gene Location: 103977-104441 bp Feature: domain Description: TadA Location: 103995-104313 bp Feature: domain Description: TadA Location: 103995-104313 bp Feature: gene Location: 104581-105741 bp Feature: domain Description: COG1373 Location: 104584-105718 bp Feature: domain Description: COG1373 Location: 104584-105718 bp Feature: gene Location: 106074-108170 bp Feature: domain Description: YkfC Location: 106200-106365 bp Feature: domain Description: YkfC Location: 1062 00-106365 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 106434-106902 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 106434-106902 bp Feature: gene Location: 108315-111281 bp Feature: domain Description: COG0610 Location: 108462-110985 bp Feature: domain Description: COG0610 Location: 108462 -110985 bp Feature: gene Location: 111278-112498 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 111590-111815 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 111590-111815 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 111860-112442 bp Feature: domain Description: RMtype1_S_LdeBORF1052 P-TRD2 -CR2 Location: 111860-112 442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TadA (COG0590), COG1373 (Predicted ATPase, AAA+ superfamily ), YkfC (COG3344), RVT-UG19, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RMtype1_S_LdeBORF1052P-TRD2-CR2 (cd17278)