myRT

myRT report for GCA_002632395.1_ASM263239v1

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Seq: NSJP01000397.1 Candidatus Kuenenia stuttgartiensis isolate Ru_enrich_A3 NODE_11703_length_2473_cov_5.79071, whole genome shotgun sequence (2473 bp)
Overview 1 RT 1: 1337-2425 bp Neighborhood of RT #1 [1337, 2472] COG2442 GIIM RVT-GII Feature: gene Location: 1337-1552 bp Feature: domain Description: COG2442 Location: 1343-1541 bp Feature: domain Description: COG2442 Location: 1 343-1 541 bp Feature: gene Location: 1758-2162 bp Feature: domain Description: GIIM Note: maturase Location: 1851-2064 bp Feature: domain Description: GIIM Note: maturase Location: 1 851 -2064 bp Feature: gene Location: 2173-2472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2179-2425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 79-2425 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2442 (Uncharacterized conserved protein, DUF433 family ), GIIM (pfam08388), RVT-GII

Seq: NSJP01000061.1 Candidatus Kuenenia stuttgartiensis isolate Ru_enrich_A3 NODE_1384_length_13600_cov_6.20129, whole genome shotgun sequence (13600 bp)
Overview 1 RT 1: 2-2410 bp Neighborhood of RT #1 [2, 2499] RVT-GII GIIM KilA-N Feature: gene Location: 2-784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-443 bp Feature: domain Description: GIIM Note: maturase Location: 524-737 bp Feature: domain Description: GIIM Note: maturase Location: 52 4-737 bp Feature: gene Location: 874-1923 bp Feature: gene Location: 2218-2499 bp Feature: domain Description: KilA-N Location: 2236-2410 bp Feature: domain Description: KilA-N Location: 2 2 36-2 410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KilA-N (pfam04383)

Seq: NSJP01000068.1 Candidatus Kuenenia stuttgartiensis isolate Ru_enrich_A3 NODE_1483_length_12885_cov_4.99906, whole genome shotgun sequence (12885 bp)
Overview 1 RT 1: 106-2880 bp Neighborhood of RT #1 [106, 2880] RVT-UG5 AIPR Feature: gene Location: 106-1941 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 580-1084 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 580-1084 bp Feature: gene Location: 1949-2545 bp Feature: domain Description: AIPR Location: 2033-2354 bp Feature: domain Description: AIPR Location: 203 3 -23 54 bp Feature: gene Location: 2575-2880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, AIPR (pfam10592)

Seq: NSJP01000093.1 Candidatus Kuenenia stuttgartiensis isolate Ru_enrich_A3 NODE_1694_length_11661_cov_4.34793, whole genome shotgun sequence (11661 bp)
Overview 1 RT 1: 691-3961 bp Neighborhood of RT #1 [691, 4032] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Cas_csx3 Cas_Cas02710 Feature: gene Location: 691-966 bp Feature: domain Description: Cas2_I_II_III Location: 700-931 bp Feature: domain Description: Cas2_I_II_III Location: 700-931 bp Feature: gene Location: 970-1971 bp Feature: domain Description: Cas1_I-II-III Location: 979-1933 bp Feature: domain Description: Cas1_I-II-III Location: 979-1933 bp Feature: gene Location: 1953-2897 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2154-2751 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2154 -2751 bp Feature: gene Location: 2900-3061 bp Feature: domain Description: Cas_csx3 Location: 2927-3053 bp Feature: domain Description: Cas_csx3 Location: 2927-3053 bp Feature: gene Location: 3136-4032 bp Feature: domain Description: Cas_Cas02710 Location: 3847-3961 bp Feature: domain Description: Cas_Cas02710 Location: 384 7-3961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, Cas_csx3 (pfam09620), Cas_Cas02710 (pfam09670)

Seq: NSJP01000355.1 Candidatus Kuenenia stuttgartiensis isolate Ru_enrich_A3 NODE_9311_length_2919_cov_3.28044, whole genome shotgun sequence (2919 bp)
Overview 1 RT 1: 91-2912 bp Neighborhood of RT #1 [91, 2917] RVT_N RVT-GII GIIM DarT Feature: gene Location: 91-1641 bp Feature: domain Description: RVT_N Location: 187-430 bp Feature: domain Description: RVT_N Location: 187-430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475-1102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 475 -1102 bp Feature: domain Description: GIIM Note: maturase Location: 1156-1390 bp Feature: domain Description: GIIM Note: maturase Location: 115 6-1390 bp Feature: gene Location: 1652-1915 bp Feature: gene Location: 2390-2917 bp Feature: domain Description: DarT Location: 2441-2912 bp Feature: domain Description: DarT Location: 2441-2912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DarT