myRT

myRT report for GCA_002632415.1_ASM263241v1

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Seq: NQMG01000101.1 Bacteroides sp. KFT8 KFT8_contig101, whole genome shotgun sequence (7700 bp)
Overview 1 RT 1: 2244-7697 bp Neighborhood of RT #1 [2244, 7697] RVT-DGRs Feature: gene Location: 2244-3296 bp Feature: gene Location: 3309-3518 bp Feature: gene Location: 3543-4862 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3729-4326 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3729-4326 bp Feature: gene Location: 5169-7697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: NQMG01000120.1 Bacteroides sp. KFT8 KFT8_contig121, whole genome shotgun sequence (1920 bp)
Overview 1 RT 1: 88-1917 bp Neighborhood of RT #1 [88, 1917] RVT-GII GIIM Feature: gene Location: 88-1353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292-952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 -952 bp Feature: domain Description: GIIM Note: maturase Location: 1036-1267 bp Feature: domain Description: GIIM Note: maturase Location: 1036-12 67 bp Feature: gene Location: 1364-1717 bp Feature: gene Location: 1717-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: NQMG01000002.1 Bacteroides sp. KFT8 KFT8_contig2, whole genome shotgun sequence (201561 bp)
Overview 1 RT 1: 109349-121047 bp Neighborhood of RT #1 [109349, 121047] RVT-DGRs CotH LRR_AMN1 Feature: gene Location: 109349-109639 bp Feature: gene Location: 109848-110330 bp Feature: gene Location: 110332-111639 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 110545-111139 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 110545-11113 9 bp Feature: gene Location: 112143-119708 bp Feature: domain Description: CotH Location: 115980-116868 bp Feature: domain Description: CotH Location: 115980-116868 bp Feature: domain Description: LRR_AMN1 Location: 117501-117927 bp Feature: domain Description: LRR_AMN1 Location: 117501-117927 bp Feature: gene Location: 119731-121047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CotH (pfam08757), LRR_AMN1 (sd00034)

Seq: NQMG01000046.1 Bacteroides sp. KFT8 KFT8_contig46, whole genome shotgun sequence (50712 bp)
Overview 1 RT 1: 199-6213 bp Neighborhood of RT #1 [199, 6239] Phage_int_SAM_5 INTN1_C_like RVT-DGRs Avd_like DUF1566 Feature: gene Location: 199-1494 bp Feature: domain Description: Phage_int_SAM_5 Location: 502-784 bp Feature: domain Description: Phage_int_SAM_5 Location: 502-784 bp Feature: domain Description: INTN1_C_like Location: 952-1408 bp Feature: domain Description: INTN1_C_like Location: 952-14 08 bp Feature: gene Location: 1595-3142 bp Feature: gene Location: 3465-4961 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3912-4617 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3912-4 617 bp Feature: gene Location: 4889-5284 bp Feature: domain Description: Avd_like Location: 4916-5222 bp Feature: domain Description: Avd_like Location: 4 916-5222 bp Feature: gene Location: 5430-6239 bp Feature: domain Description: DUF1566 Location: 5961-6213 bp Feature: domain Description: DUF1566 Location: 5961-6213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: NQMG01000053.1 Bacteroides sp. KFT8 KFT8_contig53, whole genome shotgun sequence (45398 bp)
Overview 1 RT 1: 32538-37888 bp Neighborhood of RT #1 [32538, 39057] Abhydrolase_7 GIIM RVT-GII RVT-GII Mfa_like_1 Feature: gene Location: 32538-33782 bp Feature: domain Description: Abhydrolase_7 Location: 32619-33771 bp Feature: domain Description: Abhydrolase_7 Location: 32619-33771 bp Feature: gene Location: 33972-34304 bp Feature: domain Description: GIIM Note: maturase Location: 33990-34191 bp Feature: domain Description: GIIM Note: maturase Location: 33990-34191 bp Feature: gene Location: 34442-35242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34655-35237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3465 5 -35 237 bp Feature: gene Location: 35964-36275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35967-36231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 967-36231 bp Feature: gene Location: 36396-36560 bp Feature: gene Location: 37015-39057 bp Feature: domain Description: Mfa_like_1 Location: 37174-37888 bp Feature: domain Description: Mfa_like_1 Location: 37174-37888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Abhydrolase_7 (pfam12715), GIIM (pfam08388), RVT-GII, Mfa_like_1 (pfam13149)

Seq: NQMG01000072.1 Bacteroides sp. KFT8 KFT8_contig72, whole genome shotgun sequence (29000 bp)
Overview 1 RT 1: 12353-24488 bp Neighborhood of RT #1 [12353, 24488] rpsA DUF4011 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons Feature: gene Location: 12353-14155 bp Feature: domain Description: rpsA Location: 12422-14039 bp Feature: domain Description: rpsA Location: 12422-14039 bp Feature: gene Location: 14252-20209 bp Feature: domain Description: DUF4011 Location: 15482-15995 bp Feature: domain Description: DUF4011 Location: 15482-15995 bp Feature: domain Description: DEXXQc_SF1 Location: 16334-18521 bp Feature: domain Description: DEXXQc_SF1 Location: 16 334-18521 bp Feature: domain Description: TIGR00376 Location: 18650-19040 bp Feature: domain Description: TIGR00376 Location: 186 50-19040 bp Feature: domain Description: MTES_1575 Location: 19193-19478 bp Feature: domain Description: MTES_1575 Location: 19193-19478 bp Feature: domain Description: DUF3320 Location: 19718-19859 bp Feature: domain Description: DUF3320 Location: 19718-19859 bp Feature: gene Location: 20211-21341 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20532-21075 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20532-21075 bp Feature: gene Location: 21547-23754 bp Feature: gene Location: 24354-24488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons