myRT

myRT report for GCA_002632755.1_ASM263275v1

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Seq: NJAK01000001.1 Xenorhabdus ishibashii strain DSM 22670 Xish_1, whole genome shotgun sequence (3294668 bp)
Overview 1 RT 1: 291556-294342 bp 2 RT 2: 2681229-2687466 bp Neighborhood of RT #1 [291556, 294342] HTH_Tnp_IS1 RVT-GII DDE_Tnp_IS1 Neighborhood of RT #2 [2681229, 2687939] DDE_Tnp_1_assoc YhhI YhhI RVT-GII GIIM DDE_Tnp_1_3 COG4643 AAA_25 Feature: gene Location: 291556-291831 bp Feature: domain Description: HTH_Tnp_IS1 Location: 291685-291817 bp Feature: domain Description: HTH_Tnp_IS1 Location: 291 685-291 81 7 bp Feature: gene Location: 291865-292413 bp Feature: gene Location: 292292-293146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292640-293102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292640-2931 02 bp Feature: gene Location: 293360-293728 bp Feature: domain Description: DDE_Tnp_IS1 Location: 293366-293720 bp Feature: domain Description: DDE_Tnp_IS1 Location: 293366-293720 bp Feature: gene Location: 294034-294342 bp Feature: gene Location: 2681229-2682326 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2681247-2681502 bp Feature: domain Description: DDE_Tnp_1 _assoc Location: 2681 247-2681 502 bp Feature: domain Description: YhhI Location: 2681688-2681874 bp Feature: domain Description: YhhI Location: 2681 688-2681 874 bp Feature: domain Description: YhhI Location: 2682048-2682258 bp Feature: domain Description: YhhI Location: 2682048-2682258 bp Feature: gene Location: 2682775-2683011 bp Feature: gene Location: 2683022-2684356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2683307-2683994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2683307-2683994 bp Feature: domain Description: GIIM Note: maturase Location: 2684129-2684282 bp Feature: domain Description: GIIM Note: maturase Location: 26841 29-2684282 bp Feature: gene Location: 2684557-2685306 bp Feature: domain Description: DDE_Tnp_1_3 Location: 2684734-2685196 bp Feature: domain Description: DDE_Tnp_1 _3 Location: 2684734-26851 96 bp Feature: gene Location: 2685834-2687939 bp Feature: domain Description: COG4643 Location: 2685924-2686848 bp Feature: domain Description: COG4643 Location: 2685924-2686848 bp Feature: domain Description: AAA_25 Location: 2686965-2687466 bp Feature: domain Description: AAA_25 Location: 2686965-2687466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_IS1 (pfam12759), RVT-GII, DDE_Tnp_IS1 (pfam03400), DDE_Tnp_1_assoc (pfam13808), YhhI (COG5433), GIIM (pfam08388), DDE_Tnp_1_3 (pfam13612), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), AAA_25 (pfam13481)