myRT

myRT report for GCA_002636515.1_ASM263651v1

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Seq: CP023933.1 Klebsiella pneumoniae strain FDAARGOS_443 chromosome, complete genome (5460389 bp)
Overview 1 RT 1: 278628-283509 bp 2 RT 2: 733245-737303 bp 3 RT 3: 895835-899871 bp 4 RT 4: 3913012-3916261 bp 5 RT 5: 4237291-4243699 bp 6 RT 6: 4312421-4316529 bp 7 RT 7: 4461943-4467820 bp Neighborhood of RT #1 [278628, 283514] YccC PRK10016 RVT-GII dacD Neighborhood of RT #2 [733245, 737303] Terminase_2 RVT-GII Neighborhood of RT #3 [895835, 900725] DinI RVT-GII Phage_GPA Neighborhood of RT #4 [3913012, 3916653] YbjK int RVT-GII Neighborhood of RT #5 [4237291, 4243699] AbiH PRK05318 RVT-GII PRK10597 Neighborhood of RT #6 [4312421, 4316531] DinI RVT-GII PRK10276 umuC Neighborhood of RT #7 [4461943, 4467822] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 278628-279686 bp Feature: domain Description: YccC Location: 278634-279672 bp Feature: domain Description: YccC Location: 278634-279672 bp Feature: gene Location: 279785-280258 bp Feature: domain Description: PRK10016 Location: 279788-280247 bp Feature: domain Description: PRK1 001 6 Location: 279788-280247 bp Feature: gene Location: 280340-281824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280742-281432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280742-281 432 bp Feature: gene Location: 281833-282000 bp Feature: gene Location: 282345-283514 bp Feature: domain Description: dacD Location: 282354-283509 bp Feature: domain Description: dacD Location: 282354-283509 bp Feature: gene Location: 733245-733829 bp Feature: domain Description: Terminase_2 Location: 733290-733755 bp Feature: domain Description: Terminase_2 Location: 733290-733755 bp Feature: gene Location: 733907-734164 bp Feature: gene Location: 734565-736052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734970-735660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 734970-735660 bp Feature: gene Location: 736149-736487 bp Feature: gene Location: 736683-737303 bp Feature: gene Location: 895835-896068 bp Feature: domain Description: DinI Location: 895880-896063 bp Feature: domain Description: DinI Location: 895880-896063 bp Feature: gene Location: 896080-896268 bp Feature: gene Location: 896376-897860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896778-897468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 896778-897468 bp Feature: gene Location: 897869-898036 bp Feature: gene Location: 898341-900725 bp Feature: domain Description: Phage_GPA Location: 898905-899871 bp Feature: domain Description: Phage_GPA Location: 898905-899871 bp Feature: gene Location: 3913012-3913575 bp Feature: domain Description: YbjK Location: 3913018-3913555 bp Feature: domain Description: YbjK Location: 391 301 8-391 3555 bp Feature: gene Location: 3913698-3914750 bp Feature: domain Description: int Location: 3913701-3914700 bp Feature: domain Description: int Location: 391 3701 -391 4700 bp Feature: gene Location: 3915166-3916653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3915571-3916261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 5571 -391 6261 bp Feature: gene Location: 4237291-4238160 bp Feature: domain Description: AbiH Location: 4237300-4238068 bp Feature: domain Description: AbiH Location: 4237300-4238068 bp Feature: gene Location: 4239399-4240760 bp Feature: domain Description: PRK05318 Location: 4239423-4240722 bp Feature: domain Description: PRK0531 8 Location: 4239423-4240722 bp Feature: gene Location: 4241598-4243085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4242003-4242693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4242003-4242693 bp Feature: gene Location: 4243164-4243397 bp Feature: domain Description: PRK10597 Location: 4243167-4243392 bp Feature: domain Description: PRK1 0597 Location: 42431 67-4243392 bp Feature: gene Location: 4243442-4243699 bp Feature: gene Location: 4312421-4312663 bp Feature: domain Description: DinI Location: 4312472-4312652 bp Feature: domain Description: DinI Location: 431 2472-431 2652 bp Feature: gene Location: 4312678-4312824 bp Feature: gene Location: 4313278-4314765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4313683-4314373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 3683-431 4373 bp Feature: gene Location: 4314844-4315263 bp Feature: domain Description: PRK10276 Location: 4314847-4315258 bp Feature: domain Description: PRK1 0276 Location: 431 4847-431 5258 bp Feature: gene Location: 4315266-4316531 bp Feature: domain Description: umuC Location: 4315269-4316529 bp Feature: domain Description: umuC Location: 431 5269-431 6529 bp Feature: gene Location: 4461943-4462659 bp Feature: domain Description: Rve Location: 4461958-4462603 bp Feature: domain Description: Rve Location: 4461 958-4462603 bp Feature: gene Location: 4462665-4463174 bp Feature: domain Description: PinE Location: 4462713-4463166 bp Feature: domain Description: PinE Location: 446271 3-44631 66 bp Feature: gene Location: 4464569-4466056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4464974-4465664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4464974-4465664 bp Feature: gene Location: 4466136-4466555 bp Feature: domain Description: PRK10276 Location: 4466139-4466550 bp Feature: domain Description: PRK1 0276 Location: 44661 39-4466550 bp Feature: gene Location: 4466557-4467822 bp Feature: domain Description: umuC Location: 4466560-4467820 bp Feature: domain Description: umuC Location: 4466560-4467820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), Terminase_2 (pfam03592), DinI (pfam06183), Phage_GPA (pfam05840), YbjK (COG3226), int (PHA02601), AbiH (pfam14253)
PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: CP023937.1 Klebsiella pneumoniae strain FDAARGOS_443 plasmid unnamed1, complete sequence (279104 bp)
Overview 1 RT 1: 54175-57424 bp Neighborhood of RT #1 [54175, 57438] RVT-GII PRK10276 Feature: gene Location: 54175-54396 bp Feature: gene Location: 54658-54888 bp Feature: gene Location: 55123-56610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55528-56218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5552 8-562 18 bp Feature: gene Location: 56616-56783 bp Feature: gene Location: 57013-57438 bp Feature: domain Description: PRK10276 Location: 57016-57424 bp Feature: domain Description: PRK102 76 Location: 57016-5742 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP023934.1 Klebsiella pneumoniae strain FDAARGOS_443 plasmid unnamed3, complete sequence (77986 bp)
Overview 1 RT 1: 40674-44863 bp 2 RT 2: 73649-77089 bp Neighborhood of RT #1 [40674, 44863] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Neighborhood of RT #2 [73649, 77089] DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 40674-41345 bp Feature: domain Description: Plasmid_stab_B Location: 40689-40896 bp Feature: domain Description: Plasmid_stab_B Location: 40689-40896 bp Feature: domain Description: Plasmid_stab_B Location: 41001-41208 bp Feature: domain Description: Plasmid_stab_B Location: 41001-41208 bp Feature: gene Location: 41348-42319 bp Feature: domain Description: StbA Location: 41351-42296 bp Feature: domain Description: StbA Location: 413 51-42296 bp Feature: gene Location: 42568-44055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42973-43663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42973 -43 663 bp Feature: gene Location: 44061-44228 bp Feature: gene Location: 44468-44863 bp Feature: gene Location: 73649-74071 bp Feature: domain Description: DUF1380 Location: 73652-73946 bp Feature: domain Description: DUF13 80 Location: 73 652-73 946 bp Feature: gene Location: 74068-74259 bp Feature: gene Location: 74573-76240 bp Feature: RT Description: RVT_N Location: 74621-74858 bp Feature: RT Description: RVT_N Location: 74621-74858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74909-75551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74909-75551 bp Feature: domain Description: GIIM Note: maturase Location: 75602-75836 bp Feature: domain Description: GIIM Note: maturase Location: 75602-7583 6 bp Feature: domain Description: HNHc Note: nucleases Location: 76046-76205 bp Feature: domain Description: HNHc Note: nucleases Location: 76046-76205 bp Feature: gene Location: 76520-76702 bp Feature: gene Location: 76814-77089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, DUF1380 (pfam07128), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507)

Seq: CP023932.1 Klebsiella pneumoniae strain FDAARGOS_443 plasmid unnamed4, complete sequence (11972 bp)
Overview 1 RT 1: 558-4261 bp Neighborhood of RT #1 [558, 4275] RVT-GII Cloacin E2R135 Cytotoxic Cloacin_immun Feature: gene Location: 558-725 bp Feature: gene Location: 731-2218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136-1826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1136-1826 bp Feature: gene Location: 2323-4008 bp Feature: domain Description: Cloacin Location: 2458-3280 bp Feature: domain Description: Cloacin Location: 24 58-3280 bp Feature: domain Description: E2R135 Location: 3289-3694 bp Feature: domain Description: E2R135 Location: 3289-3694 bp Feature: domain Description: Cytotoxic Location: 3748-3997 bp Feature: domain Description: Cytotoxic Location: 374 8-3997 bp Feature: gene Location: 4018-4275 bp Feature: domain Description: Cloacin_immun Location: 4024-4261 bp Feature: domain Description: Cloacin_immun Location: 4 024 -4 261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cloacin (pfam03515), E2R135 (pfam11570), Cytotoxic (pfam09000), Cloacin_immun (pfam03513), RVT-GII