myRT

myRT report for GCA_002683815.1_ASM268381v1

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Seq: NYUC01000016.1 Verrucomicrobiales bacterium isolate CPC52 MHASMcontig_829917, whole genome shotgun sequence (6460 bp)
Overview 1 RT 1: 582-5149 bp Neighborhood of RT #1 [582, 5976] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 582-725 bp Feature: gene Location: 728-2002 bp Feature: gene Location: 2083-5976 bp Feature: domain Description: retropepsin_like Location: 2146-2383 bp Feature: domain Description: retropepsin_like Location: 21 46-2383 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3163-3334 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 31 63-3334 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3688-4048 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3688-4048 bp Feature: domain Description: Integrase_H2C2 Location: 4600-4765 bp Feature: domain Description: Integrase_H2C2 Location: 4600-4765 bp Feature: domain Description: rve Location: 4819-5149 bp Feature: domain Description: rve Location: 481 9-51 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-UG11/RVT-GII/RVT-Retrons(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)

Seq: NYUC01000017.1 Verrucomicrobiales bacterium isolate CPC52 MHASMcontig_838755, whole genome shotgun sequence (6119 bp)
Overview 1 RT 1: 233-5316 bp Neighborhood of RT #1 [233, 6116] retropepsin_like_LTR_2 RVT-DGRs RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 233-1372 bp Feature: gene Location: 1508-1642 bp Feature: gene Location: 2391-6116 bp Feature: domain Description: retropepsin_like_LTR_2 Location: 2415-2637 bp Feature: domain Description: retropepsin_like_LTR_2 Location: 2 415-2 637 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3450-3615 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3450-3615 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3930-4281 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 3930-42 81 bp Feature: domain Description: Integrase_H2C2 Location: 4773-4932 bp Feature: domain Description: Integrase_H2 C2 Location: 4773-4932 bp Feature: domain Description: rve Location: 4983-5316 bp Feature: domain Description: rve Location: 4983-5316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like_LTR_2 (cd05484), RVT-DGRs, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)