myRT

myRT report for GCA_002684595.1_ASM268459v1

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Seq: NYVN01000024.1 Novosphingobium sp. isolate CPC302 91500, whole genome shotgun sequence (11232 bp)
Overview 1 RT 1: 3-4999 bp Neighborhood of RT #1 [3, 5370] TauE HTH_28 RVT-UG12 PD_CobS HxlR Feature: gene Location: 3-563 bp Feature: domain Description: TauE Location: 24-543 bp Feature: domain Description: TauE Location: 24-543 bp Feature: gene Location: 1031-1354 bp Feature: domain Description: HTH_28 Location: 1100-1214 bp Feature: domain Description: HTH_28 Location: 1 1 00-1 21 4 bp Feature: gene Location: 1757-3304 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2036-2486 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 2036-2486 bp Feature: gene Location: 3372-4364 bp Feature: domain Description: PD_CobS Location: 3408-4350 bp Feature: domain Description: PD_CobS Location: 3408-4350 bp Feature: gene Location: 4642-5370 bp Feature: domain Description: HxlR Location: 4723-4999 bp Feature: domain Description: HxlR Location: 4723-4999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauE (pfam01925), HTH_28 (pfam13518), RVT-UG12, PD_CobS (TIGR01650), HxlR (pfam01638)

Seq: NYVN01000214.1 Novosphingobium sp. isolate CPC302 94977, whole genome shotgun sequence (8485 bp)
Overview 1 RT 1: 3090-7390 bp Neighborhood of RT #1 [3090, 7401] InsE PHA02517 RVT-GII GIIM PHA02517 PRK10396 Feature: gene Location: 3090-3413 bp Feature: domain Description: InsE Location: 3105-3405 bp Feature: domain Description: InsE Location: 3105-3405 bp Feature: gene Location: 3416-3934 bp Feature: domain Description: PHA02517 Location: 3476-3833 bp Feature: domain Description: PHA02 517 Location: 3476-3833 bp Feature: gene Location: 4470-5999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4743-5478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4743-5478 bp Feature: domain Description: GIIM Note: maturase Location: 5553-5778 bp Feature: domain Description: GIIM Note: maturase Location: 5553-5778 bp Feature: gene Location: 6100-6558 bp Feature: domain Description: PHA02517 Location: 6103-6547 bp Feature: domain Description: PHA02 517 Location: 6103-6547 bp Feature: gene Location: 6736-7401 bp Feature: domain Description: PRK10396 Location: 6754-7390 bp Feature: domain Description: PRK10396 Location: 6754-7390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10396 (hypothetical protein; Provisional)

Seq: NYVN01000287.1 Novosphingobium sp. isolate CPC302 MHASMcontig_720942, whole genome shotgun sequence (7500 bp)
Overview 1 RT 1: 1-4970 bp Neighborhood of RT #1 [1, 5350] TauE HTH_28 RVT-UG12 PD_CobS HxlR Feature: gene Location: 1-642 bp Feature: domain Description: TauE Location: 22-637 bp Feature: domain Description: TauE Location: 22-63 7 bp Feature: gene Location: 1110-1433 bp Feature: domain Description: HTH_28 Location: 1179-1293 bp Feature: domain Description: HTH_28 Location: 1179-1293 bp Feature: gene Location: 1836-3383 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2115-2565 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2115-2565 bp Feature: gene Location: 3451-4443 bp Feature: domain Description: PD_CobS Location: 3487-4429 bp Feature: domain Description: PD_CobS Location: 3 487-4429 bp Feature: gene Location: 4721-5350 bp Feature: domain Description: HxlR Location: 4802-4970 bp Feature: domain Description: HxlR Location: 4802-4970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauE (pfam01925), HTH_28 (pfam13518), RVT-UG12, PD_CobS (TIGR01650), HxlR (pfam01638)