myRT

myRT report for GCA_002684805.1_ASM268480v1

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Seq: NYVU01000042.1 Flavobacteriaceae bacterium isolate CPC294 67210, whole genome shotgun sequence (35011 bp)
Overview 1 RT 1: 189-5295 bp Neighborhood of RT #1 [189, 5324] CusA DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 189-1304 bp Feature: domain Description: CusA Location: 195-1299 bp Feature: domain Description: CusA Location: 1 95-1 299 bp Feature: gene Location: 1547-2320 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1559-2162 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 559-21 62 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2192-2291 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 21 92-2291 bp Feature: gene Location: 2426-3664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2639-3293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2639-3293 bp Feature: domain Description: GIIM Note: maturase Location: 3371-3590 bp Feature: domain Description: GIIM Note: maturase Location: 3371 -3590 bp Feature: gene Location: 4176-4961 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4320-4542 bp Feature: domain Description: LZ_Tnp_IS66 Location: 4320-4542 bp Feature: domain Description: zf-IS66 Location: 4572-4662 bp Feature: domain Description: zf-IS66 Location: 4572-4662 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4719-4944 bp Feature: domain Description: DDE_Tnp_IS66 Location: 471 9-4944 bp Feature: gene Location: 5037-5324 bp Feature: domain Description: TnpB_IS66 Location: 5040-5295 bp Feature: domain Description: TnpB_IS66 Location: 5040-5295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), CusA (COG3696), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), TnpB_IS66 (pfam05717)