myRT

myRT report for GCA_002685875.1_ASM268587v1

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Seq: NYYC01000020.1 Deltaproteobacteria bacterium isolate ARS88 69530, whole genome shotgun sequence (18026 bp)
Overview 1 RT 1: 4639-11213 bp Neighborhood of RT #1 [4639, 11230] DUF1788 DUF1819 RVT-Retrons COG3864 TypA rph Feature: gene Location: 4639-5244 bp Feature: domain Description: DUF1788 Location: 4834-5215 bp Feature: domain Description: DUF1 788 Location: 4834-521 5 bp Feature: gene Location: 5241-5924 bp Feature: domain Description: DUF1819 Location: 5343-5835 bp Feature: domain Description: DUF1 81 9 Location: 5343-5835 bp Feature: gene Location: 6143-8800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7751-8003 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7751 -8003 bp Feature: domain Description: COG3864 Location: 8162-8792 bp Feature: domain Description: COG3864 Location: 81 62-8792 bp Feature: gene Location: 8613-10430 bp Feature: domain Description: TypA Location: 8625-10419 bp Feature: domain Description: TypA Location: 8625-1 041 9 bp Feature: gene Location: 10481-11230 bp Feature: domain Description: rph Location: 10502-11213 bp Feature: domain Description: rph Location: 1 0502-1 1 21 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1788 (pfam08747), DUF1819 (pfam08849), RVT-Retrons, COG3864 (Predicted metal-dependent peptidase ), TypA (COG1217), rph (PRK00173)

Seq: NYYC01000145.1 Deltaproteobacteria bacterium isolate ARS88 MHASMcontig_414264, whole genome shotgun sequence (7573 bp)
Overview 1 RT 1: 386-7202 bp Neighborhood of RT #1 [386, 7202] zf-CCHC RNase_HI_like RVT-UNC Feature: gene Location: 386-2014 bp Feature: domain Description: zf-CCHC Location: 1274-1319 bp Feature: domain Description: zf-CCHC Location: 12 74-1319 bp Feature: gene Location: 2136-6503 bp Feature: domain Description: RNase_HI_like Location: 2151-2571 bp Feature: domain Description: RNase_HI_like Location: 2 151-2 571 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5028-5640 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 502 8-5640 bp Feature: gene Location: 6606-7202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-CCHC (pfam00098), RNase_HI_like (cd09279), RVT-UG11/RVT-CRISPR/RVT-Retrons/RVT-GII(RVT-UNC)