myRT

myRT report for GCA_002686845.1_ASM268684v1

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Seq: NYYR01000152.1 Pseudomonas sp. isolate ARS733 53843, whole genome shotgun sequence (11682 bp)
Overview 1 RT 1: 8557-11640 bp Neighborhood of RT #1 [8557, 11681] dut PRK05579 RVT-GII GIIM HNHc Feature: gene Location: 8557-9012 bp Feature: domain Description: dut Location: 8563-9007 bp Feature: domain Description: dut Location: 8563-9007 bp Feature: gene Location: 9015-10223 bp Feature: domain Description: PRK05579 Location: 9021-10215 bp Feature: domain Description: PRK05579 Location: 9021 -1 021 5 bp Feature: gene Location: 10431-11681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10434-10950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0434-1 0950 bp Feature: domain Description: GIIM Note: maturase Location: 11028-11256 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 028-1 1 256 bp Feature: domain Description: HNHc Note: nucleases Location: 11484-11640 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 484-1 1 640 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NYYR01000102.1 Pseudomonas sp. isolate ARS733 MHASMcontig_333551, whole genome shotgun sequence (6102 bp)
Overview 1 RT 1: 2152-5906 bp Neighborhood of RT #1 [2152, 5906] RpoE zf-HC2 RVT-UNC Feature: gene Location: 2152-2754 bp Feature: domain Description: RpoE Location: 2161-2737 bp Feature: domain Description: RpoE Location: 2 161-2 737 bp Feature: gene Location: 2748-2981 bp Feature: domain Description: zf-HC2 Location: 2760-2862 bp Feature: domain Description: zf-HC2 Location: 2 760-2 862 bp Feature: gene Location: 3217-4935 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3556-3961 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3556-3961 bp Feature: gene Location: 4932-5906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpoE (COG3343), zf-HC2 (pfam13490), RVT-UG5/RVT-UG17/RVT-DGRs/RVT-UG6(RVT-UNC)