myRT

myRT report for GCA_002686955.1_ASM268695v1

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Seq: NYZA01000071.1 Gemmatimonadetes bacterium isolate ARS67 MHASMcontig_398953, whole genome shotgun sequence (14783 bp)
Overview 1 RT 1: 137-7170 bp Neighborhood of RT #1 [137, 7170] AAA_15 AAA_15 RVT-GII GIIM Beta_helix Beta_helix Beta_helix Feature: gene Location: 137-1996 bp Feature: domain Description: AAA_15 Location: 152-299 bp Feature: domain Description: AAA_1 5 Location: 1 52-299 bp Feature: domain Description: AAA_15 Location: 986-1298 bp Feature: domain Description: AAA_1 5 Location: 986-1 298 bp Feature: gene Location: 2156-3481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2465-3065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2465-3065 bp Feature: domain Description: GIIM Note: maturase Location: 3119-3326 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 9-3326 bp Feature: gene Location: 4105-6735 bp Feature: domain Description: Beta_helix Location: 4435-4744 bp Feature: domain Description: Beta_helix Location: 4435-4744 bp Feature: domain Description: Beta_helix Location: 4774-5182 bp Feature: domain Description: Beta_helix Location: 4774-51 82 bp Feature: domain Description: Beta_helix Location: 5788-6157 bp Feature: domain Description: Beta_helix Location: 5788-61 57 bp Feature: gene Location: 6838-7170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-GII, GIIM (pfam08388), Beta_helix (pfam13229)

Seq: NYZA01000181.1 Gemmatimonadetes bacterium isolate ARS67 MHASMcontig_435019, whole genome shotgun sequence (16501 bp)
Overview 1 RT 1: 13697-16106 bp Neighborhood of RT #1 [13697, 16111] GT4_PimA-like HAD_like RVT-GII Feature: gene Location: 13697-14992 bp Feature: domain Description: GT4_PimA-like Location: 13721-14972 bp Feature: domain Description: GT4_PimA-like Location: 1372 1-14972 bp Feature: gene Location: 15032-15724 bp Feature: domain Description: HAD_like Location: 15053-15629 bp Feature: domain Description: HAD_like Location: 15053-1562 9 bp Feature: gene Location: 15914-16111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15917-16106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15917-16106 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), HAD_like (cl21460), RVT-GII

Seq: NYZA01000265.1 Gemmatimonadetes bacterium isolate ARS67 MHASMcontig_461900, whole genome shotgun sequence (12180 bp)
Overview 1 RT 1: 9712-12001 bp Neighborhood of RT #1 [9712, 12177] BLOC1_2 DUF4041 T5orf172 RVT-GII GIIM Feature: gene Location: 9712-9861 bp Feature: gene Location: 9748-11382 bp Feature: domain Description: BLOC1_2 Location: 10009-10255 bp Feature: domain Description: BLOC1_2 Location: 10009-10255 bp Feature: domain Description: DUF4041 Location: 10516-10672 bp Feature: domain Description: DUF4041 Location: 10516-10672 bp Feature: domain Description: T5orf172 Location: 11014-11245 bp Feature: domain Description: T5orf172 Location: 11014-11245 bp Feature: gene Location: 11500-12177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11503-11740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11503 -11740 bp Feature: domain Description: GIIM Note: maturase Location: 11782-12001 bp Feature: domain Description: GIIM Note: maturase Location: 11782-12001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BLOC1_2 (pfam10046), DUF4041 (pfam13250), T5orf172 (smart00974), RVT-GII, GIIM (pfam08388)