myRT

myRT report for GCA_002690095.1_ASM269009v1

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Seq: NZDL01000036.1 Flavobacteriaceae bacterium isolate ARS104 48805, whole genome shotgun sequence (9605 bp)
Overview 1 RT 1: 2747-9122 bp Neighborhood of RT #1 [2747, 9122] RVT-UNC RVT-CRISPR-like Feature: gene Location: 2747-2974 bp Feature: gene Location: 4266-4478 bp Feature: gene Location: 4740-5201 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4902-5160 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 4902-51 60 bp Feature: gene Location: 5629-5841 bp Feature: gene Location: 6097-6420 bp Feature: gene Location: 6756-7052 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6768-6894 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6768-6894 bp Feature: gene Location: 8476-8691 bp Feature: gene Location: 8955-9122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs/RVT-CRISPR/RVT-GII/RVT-UG6(RVT-UNC), RVT-CRISPR

Seq: NZDL01000037.1 Flavobacteriaceae bacterium isolate ARS104 MHASMcontig_241155, whole genome shotgun sequence (8422 bp)
Overview 1 RT 1: 1686-6065 bp Neighborhood of RT #1 [1686, 6065] AAA_22 RVT-UNC Feature: gene Location: 1686-2849 bp Feature: domain Description: AAA_22 Location: 1911-2271 bp Feature: domain Description: AAA_2 2 Location: 1911-2 2 71 bp Feature: gene Location: 2945-3121 bp Feature: gene Location: 3176-5101 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3773-4283 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3773-42 83 bp Feature: gene Location: 5461-5802 bp Feature: gene Location: 5826-6065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_22 (pfam13401), RVT-UG11/RVT-CRISPR/RVT-GII(RVT-UNC)

Seq: NZDL01000041.1 Flavobacteriaceae bacterium isolate ARS104 MHASMcontig_262419, whole genome shotgun sequence (6979 bp)
Overview 1 RT 1: 2149-5223 bp Neighborhood of RT #1 [2149, 5223] RVT-GII Feature: gene Location: 2149-2328 bp Feature: gene Location: 2487-3002 bp Feature: gene Location: 3124-3771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3286-3643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 286-3 643 bp Feature: gene Location: 4286-4426 bp Feature: gene Location: 4933-5223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: NZDL01000046.1 Flavobacteriaceae bacterium isolate ARS104 MHASMcontig_290131, whole genome shotgun sequence (6298 bp)
Overview 1 RT 1: 102-3946 bp Neighborhood of RT #1 [102, 3946] RVT-UNC Feature: gene Location: 102-2450 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1128-1743 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1128-174 3 bp Feature: gene Location: 2873-3013 bp Feature: gene Location: 3743-3946 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: NZDL01000002.1 Flavobacteriaceae bacterium isolate ARS104 MHASMcontig_296978, whole genome shotgun sequence (8952 bp)
Overview 1 RT 1: 3453-7780 bp Neighborhood of RT #1 [3453, 8046] RVT-Retrons Peptidase_A17 DUF1758 RT_pepA17 DUF1759 Feature: gene Location: 3453-3719 bp Feature: gene Location: 3759-3968 bp Feature: gene Location: 4036-5754 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4237-4594 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4237-45 94 bp Feature: domain Description: Peptidase_A17 Location: 4801-5296 bp Feature: domain Description: Peptidase_A17 Location: 4801-5 296 bp Feature: gene Location: 5543-6874 bp Feature: domain Description: DUF1758 Location: 5822-6251 bp Feature: domain Description: DUF175 8 Location: 5 822-625 1 bp Feature: domain Description: RT_pepA17 Location: 6686-6851 bp Feature: domain Description: RT_pepA17 Location: 6686-685 1 bp Feature: gene Location: 6871-8046 bp Feature: domain Description: DUF1759 Location: 7369-7780 bp Feature: domain Description: DUF175 9 Location: 7369-7780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Peptidase_A17 (pfam05380), DUF1758 (pfam05585), RT_pepA17 (cd01644), DUF1759 (pfam03564)