myRT

myRT report for GCA_002694225.1_ASM269422v1

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Seq: NZLP01000127.1 Alteromonas sp. isolate IN32 19423, whole genome shotgun sequence (65682 bp)
Overview 1 RT 1: 42744-46035 bp Neighborhood of RT #1 [42744, 46037] DUF4878 RVT-GII GIIM HigB-like_toxin Feature: gene Location: 42744-43202 bp Feature: domain Description: DUF4878 Location: 42852-43176 bp Feature: domain Description: DUF4878 Location: 42852-431 76 bp Feature: gene Location: 43417-43692 bp Feature: gene Location: 43771-45105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44050-44668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44050-44668 bp Feature: domain Description: GIIM Note: maturase Location: 44710-44935 bp Feature: domain Description: GIIM Note: maturase Location: 4471 0-44935 bp Feature: gene Location: 45125-45451 bp Feature: gene Location: 45759-46037 bp Feature: domain Description: HigB-like_toxin Location: 45768-46035 bp Feature: domain Description: HigB-like_toxin Location: 45768-46035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4878 (pfam12870), RVT-GII, GIIM (pfam08388), HigB-like_toxin (pfam05015)

Seq: NZLP01000197.1 Alteromonas sp. isolate IN32 MHASMcontig_124490, whole genome shotgun sequence (30505 bp)
Overview 1 RT 1: 2614-6436 bp Neighborhood of RT #1 [2614, 6474] hip RVT-GII GIIM PBP2_HisK CadC1 Feature: gene Location: 2614-2901 bp Feature: domain Description: hip Location: 2617-2887 bp Feature: domain Description: hip Location: 2 617-2 887 bp Feature: gene Location: 3140-3280 bp Feature: gene Location: 3407-4795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3737-4355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3737-4355 bp Feature: domain Description: GIIM Note: maturase Location: 4403-4634 bp Feature: domain Description: GIIM Note: maturase Location: 4403-4634 bp Feature: gene Location: 5156-5893 bp Feature: domain Description: PBP2_HisK Location: 5252-5831 bp Feature: domain Description: PBP2 _HisK Location: 52 52 -5831 bp Feature: gene Location: 6034-6474 bp Feature: domain Description: CadC1 Location: 6220-6436 bp Feature: domain Description: CadC1 Location: 62 2 0-6436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hip (TIGR00988), RVT-GII, GIIM (pfam08388), PBP2_HisK (cd13704), CadC1 (COG3710)

Seq: NZLP01000198.1 Alteromonas sp. isolate IN32 MHASMcontig_125939, whole genome shotgun sequence (19226 bp)
Overview 1 RT 1: 116-5502 bp Neighborhood of RT #1 [116, 5507] AAA_15 AAA_15 RVT-Retrons HMA PRK14727 Feature: gene Location: 116-268 bp Feature: gene Location: 555-1910 bp Feature: domain Description: AAA_15 Location: 558-789 bp Feature: domain Description: AAA_15 Location: 558-789 bp Feature: domain Description: AAA_15 Location: 936-1299 bp Feature: domain Description: AAA_15 Location: 93 6-1299 bp Feature: gene Location: 1915-3060 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2182-2755 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2182-2755 bp Feature: gene Location: 3438-3566 bp Feature: gene Location: 3867-5507 bp Feature: domain Description: HMA Location: 3879-4059 bp Feature: domain Description: HMA Location: 3 879-4059 bp Feature: domain Description: PRK14727 Location: 4086-5502 bp Feature: domain Description: PRK14727 Location: 4086-5502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, HMA (pfam00403), PRK14727 (putative mercuric reductase; Provisional), AAA_15 (pfam13175)