myRT

myRT report for GCA_002694715.1_ASM269471v1

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Seq: NZMX01000004.1 Pseudomonas sp. isolate IN1 2713, whole genome shotgun sequence (7816 bp)
Overview 1 RT 1: 3944-7101 bp Neighborhood of RT #1 [3944, 7199] PFDH_like IS5 RVT-GII GIIM Feature: gene Location: 3944-5083 bp Feature: domain Description: PFDH_like Location: 3947-5075 bp Feature: domain Description: PFDH_like Location: 3947-5075 bp Feature: gene Location: 5401-5859 bp Feature: domain Description: IS5 Location: 5404-5827 bp Feature: domain Description: IS5 Location: 5404-5827 bp Feature: gene Location: 5931-7199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6144-6801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 44-6801 bp Feature: domain Description: GIIM Note: maturase Location: 6879-7101 bp Feature: domain Description: GIIM Note: maturase Location: 6879-71 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFDH_like (cd08282), IS5 (COG3039), RVT-GII, GIIM (pfam08388)

Seq: NZMX01000174.1 Pseudomonas sp. isolate IN1 MHASMcontig_27790, whole genome shotgun sequence (46300 bp)
Overview 1 RT 1: 29969-37172 bp Neighborhood of RT #1 [29969, 37192] Porin_O_P RVT-GII GIIM Hydantoinase_B HyuA Feature: gene Location: 29969-31147 bp Feature: domain Description: Porin_O_P Location: 30194-31031 bp Feature: domain Description: Porin_O_P Location: 30194-31031 bp Feature: gene Location: 31328-31807 bp Feature: gene Location: 31812-33020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32004-32619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 004-32 619 bp Feature: domain Description: GIIM Note: maturase Location: 32673-32901 bp Feature: domain Description: GIIM Note: maturase Location: 32 673-32 901 bp Feature: gene Location: 33321-35066 bp Feature: domain Description: Hydantoinase_B Location: 33336-34920 bp Feature: domain Description: Hydantoinase_B Location: 33336-3492 0 bp Feature: gene Location: 35102-37192 bp Feature: domain Description: HyuA Location: 35117-37172 bp Feature: domain Description: HyuA Location: 35117-37172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Porin_O_P (pfam07396), RVT-GII, GIIM (pfam08388), Hydantoinase_B (pfam02538), HyuA (COG0145)

Seq: NZMX01000216.1 Pseudomonas sp. isolate IN1 MHASMcontig_32025, whole genome shotgun sequence (18102 bp)
Overview 1 RT 1: 15393-17509 bp Neighborhood of RT #1 [15393, 17937] bPH_2 PinE RVT-G2L4 Feature: gene Location: 15393-15827 bp Feature: domain Description: bPH_2 Location: 15552-15756 bp Feature: domain Description: bPH_2 Location: 15552-15756 bp Feature: gene Location: 16032-16607 bp Feature: domain Description: PinE Location: 16041-16596 bp Feature: domain Description: PinE Location: 16041-16596 bp Feature: gene Location: 16702-17937 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 16921-17509 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 16921-17509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bPH_2 (pfam03703), PinE (COG1961), RVT-G2L4