myRT

myRT report for GCA_002698895.1_ASM269889v1

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Seq: PAAI01000041.1 Zunongwangia sp. isolate NAT15 59072, whole genome shotgun sequence (172275 bp)
Overview 1 RT 1: 75067-80197 bp Neighborhood of RT #1 [75067, 80202] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C CusA Feature: gene Location: 75067-75354 bp Feature: domain Description: TnpB_IS66 Location: 75070-75325 bp Feature: domain Description: TnpB_IS66 Location: 75070-75325 bp Feature: gene Location: 75430-76215 bp Feature: domain Description: LZ_Tnp_IS66 Location: 75574-75796 bp Feature: domain Description: LZ_Tnp_IS66 Location: 75574-75796 bp Feature: domain Description: zf-IS66 Location: 75826-75916 bp Feature: domain Description: zf-IS66 Location: 75826-7591 6 bp Feature: domain Description: DDE_Tnp_IS66 Location: 75973-76198 bp Feature: domain Description: DDE_Tnp_IS66 Location: 75973-761 98 bp Feature: gene Location: 76727-77965 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76940-77594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76940-77594 bp Feature: domain Description: GIIM Note: maturase Location: 77672-77891 bp Feature: domain Description: GIIM Note: maturase Location: 77672-77891 bp Feature: gene Location: 78071-78844 bp Feature: domain Description: DDE_Tnp_IS66 Location: 78083-78686 bp Feature: domain Description: DDE_Tnp_IS66 Location: 78083-78686 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 78716-78815 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 7871 6-7881 5 bp Feature: gene Location: 79087-80202 bp Feature: domain Description: CusA Location: 79093-80197 bp Feature: domain Description: CusA Location: 79093-801 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), CusA (COG3696)

Seq: PAAI01000046.1 Zunongwangia sp. isolate NAT15 62898, whole genome shotgun sequence (29090 bp)
Overview 1 RT 1: 22841-27067 bp Neighborhood of RT #1 [22841, 27156] COG3547 RVT-GII GIIM COG3795 COG4941 Feature: gene Location: 22841-23290 bp Feature: domain Description: COG3547 Location: 22865-23234 bp Feature: domain Description: COG3547 Location: 2 2 865-2 32 34 bp Feature: gene Location: 23664-23879 bp Feature: gene Location: 24143-25396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24356-25016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4356-2 5016 bp Feature: domain Description: GIIM Note: maturase Location: 25100-25319 bp Feature: domain Description: GIIM Note: maturase Location: 2 5100-2 5319 bp Feature: gene Location: 25608-25973 bp Feature: domain Description: COG3795 Location: 25617-25962 bp Feature: domain Description: COG3795 Location: 2 5617-2 5962 bp Feature: gene Location: 25954-27156 bp Feature: domain Description: COG4941 Location: 25969-27067 bp Feature: domain Description: COG4941 Location: 2 5969-2 7067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), COG3795 (Uncharacterized conserved protein ), COG4941 (Predicted RNA polymerase sigma factor, contains C-terminal TPR domain )